| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3227 |
|---|
| Symbol | |
|---|
| ID | 4690927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3601814 |
|---|
| End bp | 3603013 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639850990 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_997975 |
|---|
| Protein GI | 121610168 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR02819] formaldehyde dehydrogenase, glutathione-independent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.315388 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACGA ATCGCGGTGT CGTTTATTTG CGCCAGGGCC AGGTCGAGGT GCAGTCGATC
GCCTTTCCCG AACTGATCGA CCCTGCGGGT CGCCGCGCCG AGCATGGCGT GATCCTGAAG
GTGCTGAGCA CCAACATTTG CGGATCGGAC CAGCATATGG TGCGCGGGCG CACCACCGCG
CCGGCCGGGC TGGTGCTGGG CCATGAGATC ACCGGCGAGG TGCTCGAAGT GGGCCGCGAT
GTGCAGATGC TGACGCCGGG CGACATCGTG TCGGTGCCGT TCAACGTCGC CTGCGGGCGC
TGCCGCAGTT GCAAGGAGCA ACACACCGGC GTGTGCCTGA GCGTCAACCC GTCGCGGGCC
GGCGGCGCCT ATGGCTATGT CGACATGGGC GGCTGGATCG GCGGGCAGGC CGAATATGTG
ATGGTGCCTT ACGCCGACTT CAACTTGCTC AAGTTCCCCG ACCGCGCACA GGCGATCGAG
AAAATCCGCG ACCTGACCTG CCTGTCCGAC ATTCTGCCCA CCGGCTACCA CGGCGTGGTG
ACGGCCGGGG TAGGCCCGGG CAGCACGGTG TACGTGGCCG GGGCCGGGCC TGTCGGCCTG
GCCGCCGCCG CATCGGCCCG GCTGCTGGGT GCGGCGGTGG TCATCGTCGG CGATGTCAAT
CCGGCACGCC TGGAACATGC GCGCAAAGTG GGCTTTCAGA CCGTCGACCT GTCCAGGGAC
GCCACGCTGG CCGAACAAAT CGCGCAGATC CTGGGCACAC CGGAAGTCGA CTGCGCCGTC
GACGCGGTGG GTTTCGAGGC GCGCGGCCAT GGCCACGCGG GCTCGCAAGC CGAGGCCCCG
GCCACGGTCC TCAATTCATT GATGGAAGTC ACGCGCGCGG CCGGCAAGAT CGGCATCCCC
GGCCTGTACG TCACCGAAGA CCCGGGCGCT GTCGACAAGG CCGCGCAGCA TGGCGCGCTC
AGCATCCGCC TGGGGCTGGG TTGGGCCAAG TCGCACAGCT TTTTTACCGG CCAGACACCG
GTGATGAAAT ACAACCGCGC GCTGATGCAG GCCATCCTCT GGGATCGCAT ACAGATCGCC
GATGTGGTGG GCGTGCAAGT GATCACGCTG GATCAGGCGC CGATGGGCTA CGCCGAGTTC
GACGCGGGAG CGCCGAAGAA ATTCGTCATC GACCCGCATG GCGTGCTGAT CAAGCATTGA
|
|---|
| Protein sequence | MPTNRGVVYL RQGQVEVQSI AFPELIDPAG RRAEHGVILK VLSTNICGSD QHMVRGRTTA
PAGLVLGHEI TGEVLEVGRD VQMLTPGDIV SVPFNVACGR CRSCKEQHTG VCLSVNPSRA
GGAYGYVDMG GWIGGQAEYV MVPYADFNLL KFPDRAQAIE KIRDLTCLSD ILPTGYHGVV
TAGVGPGSTV YVAGAGPVGL AAAASARLLG AAVVIVGDVN PARLEHARKV GFQTVDLSRD
ATLAEQIAQI LGTPEVDCAV DAVGFEARGH GHAGSQAEAP ATVLNSLMEV TRAAGKIGIP
GLYVTEDPGA VDKAAQHGAL SIRLGLGWAK SHSFFTGQTP VMKYNRALMQ AILWDRIQIA
DVVGVQVITL DQAPMGYAEF DAGAPKKFVI DPHGVLIKH
|
|---|
| |