| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3207 |
|---|
| Symbol | |
|---|
| ID | 4690357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3579245 |
|---|
| End bp | 3579937 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639850970 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_997955 |
|---|
| Protein GI | 121610148 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.973641 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACGG TCCAGGACAT CAACCAGTTC TACGGCGGCT CCCATATCCT GCGCAACGTG
AGCCTGAGCG CTGCGCCGGG CAAGGTCACG GTGCTGCTCG GGCGCAACGG CGTGGGCAAA
ACCACGCTGC TCAAAAGCCT GATGGGCCTG GTGCCGATCC GCAGCGGCAG CATCCACCTG
GACGGCCAGG CCATCGACCA GGCCACACCG TACCAGCGCG CCCGCGCCGG CATAGGCTAT
GTCCCGCAGG GCCGCGAAAT CTTCGGCCGG CTCACGGTGG AAGAAAACCT GCGCATGGGC
CTGGCGTACA AAAGCGGCGC CACCCCGGTG CCGGCGCATC TGTACGAACT GTTCCCCGTG
CTCGGGCAGA TGCTCCGGCG CCGTGGCGGT GATCTGTCGG GCGGGCAGCA ACAGCAACTG
GCCATCGCCC GCGCGCTGGC CCCCGGACCG CGCCTGCTGA TCCTGGACGA GCCGACCGAA
GGCATACAGC CGAGCATCAT CAAGGACATA GGCCGCGTCA TCCGCAAGCT CGCCGACCAG
GGCGGGATGG CCATCCTGCT GTGCGAGCAG TTCTACGACT TCGCGCAGGA ACTGGCCGAC
GAGTACCTGG TGATGGAGCG CGGCGCAGTG ATCGCGCGCG GCCCGGGCAG CCAGATGCAG
GCCCGGGGCA TCCGCCAGTT GGTGGCGATC TGA
|
|---|
| Protein sequence | MLTVQDINQF YGGSHILRNV SLSAAPGKVT VLLGRNGVGK TTLLKSLMGL VPIRSGSIHL
DGQAIDQATP YQRARAGIGY VPQGREIFGR LTVEENLRMG LAYKSGATPV PAHLYELFPV
LGQMLRRRGG DLSGGQQQQL AIARALAPGP RLLILDEPTE GIQPSIIKDI GRVIRKLADQ
GGMAILLCEQ FYDFAQELAD EYLVMERGAV IARGPGSQMQ ARGIRQLVAI
|
|---|
| |