| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3181 |
|---|
| Symbol | |
|---|
| ID | 4693663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3546283 |
|---|
| End bp | 3547545 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639850943 |
|---|
| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
|---|
| Protein accession | YP_997929 |
|---|
| Protein GI | 121610122 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.488444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATCC CCTCCATTCC TTATGAACTG GCCCTGGGCT GGCGCTATAC CCGGGCCGGT
CGGGCCACGC GGCGCAACGG CTTCATTTCG TTCATCTCGG GCGTGTCGAT GCTCGGCATT
GCGCTCGGGG TGGCGGCGCT GATCATTGTG CTGTCGGTGA TGAACGGGTT TCAAAAGGAT
GTGCGCGACC GCATGCTCAG CGTGGTCTCG CACATCGAGA TCTTCGCGCC CCGGGGGGCG
GCGCTGGCCG ACCCGGCGCT GACGCTGGCG CAGGCCCGGC AGAACGTCAA CGTGATCGGC
GCGGCCCCCT TTGTCTCGGC CCAGGCCCTG CTGGCGCGCG GCGAGGACAT GAAGGGCGCG
CTGGTGCGGG GCATAGACCC GGCGCTGGAA GGCGCGGTGA CCGATCTGGC CGCCAGCAAC
GCACGGCTGC TCGGGCGGCT GGTGCCCGGC CAATTTCGCG TGGTGTTGGG CAGCGTGCTG
GCCCGTGACC TGGGCGTGGG CGTGGGCGAT GCGGTGACGC TGATCGCCCC GGCCGGCCAA
CTCACCCCGG CCGGCGTGGT GCCGCGCCTC AAGCAAATGA CGGTGGCGGG CATGTTCGAC
TCGGGCCATT ACGAATACGA CTCGGCCCTG GTGCTGCTGC ACCATCAGGA CGCCCAGCGC
ATTTTGCGCC TGGAAGGCCC GACCGGCGTG CGCCTGAAGT TGCGCGACCT GCACCGGGCG
CACGCGGTGG CGGGCGAACT GGCGCAAACC CTGAGCGGGG CATTGCTGAT CCGCGACTGG
ACGCAGCAAA ACCGCACCTG GTTTGCCGCC GTGCAGTTGG AAAAACGCAT GATGTTCATC
ATCCTCACGC TGATCGTGGC CGTGGCCGCG TTCAACCTGG TCAGCACGCT GGTGATGACC
GTGACCGACA AGCGCGCCGA CATCGCCATC TTGCGCACGC TGGGCGCCAG CCCGAAAAGC
ATCATGGGCA TTTTTGTGGT GCAAGGCGCG CTGGTCGGCG TGATCGGCAC GCTGCTCGGC
CTGGCGCTGG GCCTGGGGAT TGCGCTGCAC ATCGACGTGA TCGTGCCGGC CATCGAGCAG
GCGCTGAACG CGCGCTTTTT GCCCCAGGAC ATCTACCTGA TCAGCAAAAT GCCCAGCGAG
CCGCAAAGCG GCGACATCGT GCCGATTGCC ATGATCGCGC TGGCGCTGTC CTTCGTGGCC
ACGCTCTACC CCAGTTGGCG TGCCAGCCGG GTGAACCCGG CCGAGGCGCT GCGCCATGAA
TGA
|
|---|
| Protein sequence | MQIPSIPYEL ALGWRYTRAG RATRRNGFIS FISGVSMLGI ALGVAALIIV LSVMNGFQKD
VRDRMLSVVS HIEIFAPRGA ALADPALTLA QARQNVNVIG AAPFVSAQAL LARGEDMKGA
LVRGIDPALE GAVTDLAASN ARLLGRLVPG QFRVVLGSVL ARDLGVGVGD AVTLIAPAGQ
LTPAGVVPRL KQMTVAGMFD SGHYEYDSAL VLLHHQDAQR ILRLEGPTGV RLKLRDLHRA
HAVAGELAQT LSGALLIRDW TQQNRTWFAA VQLEKRMMFI ILTLIVAVAA FNLVSTLVMT
VTDKRADIAI LRTLGASPKS IMGIFVVQGA LVGVIGTLLG LALGLGIALH IDVIVPAIEQ
ALNARFLPQD IYLISKMPSE PQSGDIVPIA MIALALSFVA TLYPSWRASR VNPAEALRHE
|
|---|
| |