| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3178 |
|---|
| Symbol | |
|---|
| ID | 4693316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3541991 |
|---|
| End bp | 3543235 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639850940 |
|---|
| Product | L-lactate dehydrogenase (cytochrome) |
|---|
| Protein accession | YP_997926 |
|---|
| Protein GI | 121610119 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.348533 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCA CCCGCCACCC GCCCCCCGCC CACGCGCCAG GGTCTACCAT TGGGCATCTT
CCCCATCCCC GGAGAGCCAG CGTGCCCCCA CTGTCGAAAA TCACCTGCAT CGAAGACCTG
CGCCTGGTGG CCGCGCGCCG CGTGCCGCGC ATGTTTTATG ACTATGCCGA CTCGGGCTCG
TACACCGAGG GCACTTACCG TGCCAACGAG GCCGACTTTC AGGCCATCAA GCTACGCCAG
CGCGTGGCCG TGAACATGGA GGGCCGCAGC ACCCGCACGA CCATGGTGGG GCAGGATGTG
GCCATGCCGG TGGCGATTGC GCCCACCGGG CTGACCGGCA TGCAGCATGC CGACGGCGAG
ATTCTGGGCG CCAAGGCGGC CAAGGCTTTT GGCATCCCCT TTACGCTGTC CACGATGAGC
ATCTGCTCCA TCGAAGACAT TGCCGAGCAC ACGGGGCGCC ACCCGTTCTG GTTTCAGGTG
TATGTGATGC GCGACCGCGA TTTCATCGAG CGCCTGATCG ACCGCGCCAA GGCGGCCAAC
TGCTCGGCGT TGCAACTCAC GCTCGACTTG CAAATCCTCG GCCAGCGCCA CAAGGACATC
AAAAACGGCC TGTCGGCGCC GCCACGGCCC AGCCTGGCCA ACCTGATCGA CCTGGCCACC
AAGCCGCGCT GGTGCTGGGG CATGCTGGGC ACGCCGCGCC GCAGCTTCGG CAACATCGTG
GGCCATGCCA AGGATGTGGG CGATCTGTCC TCGCTGTCCG CGTGGACGGC CGAGCAGTTC
GACCCCCGGC TGCACTGGGG CGATGTCGAG TGGATCAAAA AGCGCTGGGG TGGCAAGCTG
ATCCTCAAGG GCATCATGGA CGCCGAAGAC GCGCGCCTGG CGGTGAACAG CGGCGCCGAC
GCGCTGATCG TCAGCAACCA CGGCGGCCGC CAACTCGACG GCGCACCCTC GTCGATCGCC
GCCCTGCCCG GCATTGCCGC TGCCGCAGGC AAGGCCATCG AGGTCTGGAT GGACGGCGGC
ATCCGCAGCG GGCAGGACGT GCTCAAGGCC CGCGCCCTGG GCGCGCAGGG CACGCTGATC
GGGCGCAGTT TTCTCTACGG CCTGGGCGCC TTCGGCCAGG CCGGCGTGAC CCGCGCGCTG
GAGATCATCC ACAAGGAACT GGATATCACG ATGGCGTTTT GCGGCCTCAC CGACATCAAC
CGGGTGGACG CATCCATCCT GCTGCCGGGC ACTTATCCGA CCTGA
|
|---|
| Protein sequence | MPITRHPPPA HAPGSTIGHL PHPRRASVPP LSKITCIEDL RLVAARRVPR MFYDYADSGS
YTEGTYRANE ADFQAIKLRQ RVAVNMEGRS TRTTMVGQDV AMPVAIAPTG LTGMQHADGE
ILGAKAAKAF GIPFTLSTMS ICSIEDIAEH TGRHPFWFQV YVMRDRDFIE RLIDRAKAAN
CSALQLTLDL QILGQRHKDI KNGLSAPPRP SLANLIDLAT KPRWCWGMLG TPRRSFGNIV
GHAKDVGDLS SLSAWTAEQF DPRLHWGDVE WIKKRWGGKL ILKGIMDAED ARLAVNSGAD
ALIVSNHGGR QLDGAPSSIA ALPGIAAAAG KAIEVWMDGG IRSGQDVLKA RALGAQGTLI
GRSFLYGLGA FGQAGVTRAL EIIHKELDIT MAFCGLTDIN RVDASILLPG TYPT
|
|---|
| |