Gene Veis_3165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3165 
Symbol 
ID4691754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3527218 
End bp3528144 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content65% 
IMG OID639850927 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_997913 
Protein GI121610106 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00840402 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGC CCGCCCTGCC ACGCCAGACC CGGCCCGAAC TGGAGCACGA CTACACGCGC 
TCGACGGAGC TGGGATACGA GCCGCCCGAG GCGGCAGGCT TCATCCGATG CCTGTCGCAT
GGCTTTCCGA CACCGCTGGC GCGCTGGCAC TACCACGACG AGTACGAACT GCACCTGATC
ACGGCCACTT CGGGCAAGGT CTTCGTGGGC GACTGGATCG GGCAGTTCCA GCCCGGCCAT
CTGGTGCTGA CCGGGCCGCG CCTGCCGCAC AACTGGATCA GCATGGACCT GCCCGAAGGC
GGCGTACCCG AGCGCGACCT GGTCATACAG TTCCAGCACG CCCCGATAGC GGCCAGTTGC
GAAACCATCC CCGAACTGCG CGAACTGCTG CCGCTGCTCG AGCGCGCGCG CCACGGCGTC
GAATTCTTTG GCCTGCAGGC GCAGGCGGCG CAGCACTGGC AGCGCATCAA GGCGCGCCAG
GGGCTGGCCC GGTTTGCCGC GTTCTGCGGC CTCATGAGCG AACTGGCCCA CAGCACCGAC
TTTCGCCTGC TATCGAGCAC GCAACTGCAA AGCGAGGACA ACGACGCCGA GCTCGACCAG
ATCAACGCCA TCGTCAGCCG CATCACCGAC CACCTGGCCG AACCGTTCTC GGCGGCCGAC
CTGGCGCAGG AACTGGGCAT GACCGAGAGC CGCTTCTCGC GCTTTTTTCG CCGCGCCACC
GGCAACCGCT TCACCGACTT CGTGAACCTG GTGCGCGTGA ACCGTGCCTG CCAACTGCTG
ATGGAGACGG ACCACTACAT CACCCGCATC GCCTACGACG TGGGGTTCAA CAACATGGCC
AATTTCAATC GCCGTTTCCT GAACATCAAG GGCATGACAC CCAGCGAATA CCGCAAGCAG
GGCACAGGCC GCTTCGGGAT GAAATGA
 
Protein sequence
MAMPALPRQT RPELEHDYTR STELGYEPPE AAGFIRCLSH GFPTPLARWH YHDEYELHLI 
TATSGKVFVG DWIGQFQPGH LVLTGPRLPH NWISMDLPEG GVPERDLVIQ FQHAPIAASC
ETIPELRELL PLLERARHGV EFFGLQAQAA QHWQRIKARQ GLARFAAFCG LMSELAHSTD
FRLLSSTQLQ SEDNDAELDQ INAIVSRITD HLAEPFSAAD LAQELGMTES RFSRFFRRAT
GNRFTDFVNL VRVNRACQLL METDHYITRI AYDVGFNNMA NFNRRFLNIK GMTPSEYRKQ
GTGRFGMK