Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3165 |
Symbol | |
ID | 4691754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3527218 |
End bp | 3528144 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639850927 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_997913 |
Protein GI | 121610106 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00840402 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCATGC CCGCCCTGCC ACGCCAGACC CGGCCCGAAC TGGAGCACGA CTACACGCGC TCGACGGAGC TGGGATACGA GCCGCCCGAG GCGGCAGGCT TCATCCGATG CCTGTCGCAT GGCTTTCCGA CACCGCTGGC GCGCTGGCAC TACCACGACG AGTACGAACT GCACCTGATC ACGGCCACTT CGGGCAAGGT CTTCGTGGGC GACTGGATCG GGCAGTTCCA GCCCGGCCAT CTGGTGCTGA CCGGGCCGCG CCTGCCGCAC AACTGGATCA GCATGGACCT GCCCGAAGGC GGCGTACCCG AGCGCGACCT GGTCATACAG TTCCAGCACG CCCCGATAGC GGCCAGTTGC GAAACCATCC CCGAACTGCG CGAACTGCTG CCGCTGCTCG AGCGCGCGCG CCACGGCGTC GAATTCTTTG GCCTGCAGGC GCAGGCGGCG CAGCACTGGC AGCGCATCAA GGCGCGCCAG GGGCTGGCCC GGTTTGCCGC GTTCTGCGGC CTCATGAGCG AACTGGCCCA CAGCACCGAC TTTCGCCTGC TATCGAGCAC GCAACTGCAA AGCGAGGACA ACGACGCCGA GCTCGACCAG ATCAACGCCA TCGTCAGCCG CATCACCGAC CACCTGGCCG AACCGTTCTC GGCGGCCGAC CTGGCGCAGG AACTGGGCAT GACCGAGAGC CGCTTCTCGC GCTTTTTTCG CCGCGCCACC GGCAACCGCT TCACCGACTT CGTGAACCTG GTGCGCGTGA ACCGTGCCTG CCAACTGCTG ATGGAGACGG ACCACTACAT CACCCGCATC GCCTACGACG TGGGGTTCAA CAACATGGCC AATTTCAATC GCCGTTTCCT GAACATCAAG GGCATGACAC CCAGCGAATA CCGCAAGCAG GGCACAGGCC GCTTCGGGAT GAAATGA
|
Protein sequence | MAMPALPRQT RPELEHDYTR STELGYEPPE AAGFIRCLSH GFPTPLARWH YHDEYELHLI TATSGKVFVG DWIGQFQPGH LVLTGPRLPH NWISMDLPEG GVPERDLVIQ FQHAPIAASC ETIPELRELL PLLERARHGV EFFGLQAQAA QHWQRIKARQ GLARFAAFCG LMSELAHSTD FRLLSSTQLQ SEDNDAELDQ INAIVSRITD HLAEPFSAAD LAQELGMTES RFSRFFRRAT GNRFTDFVNL VRVNRACQLL METDHYITRI AYDVGFNNMA NFNRRFLNIK GMTPSEYRKQ GTGRFGMK
|
| |