| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3151 |
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| Symbol | |
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| ID | 4690324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 3506480 |
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| End bp | 3508099 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639850909 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_997900 |
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| Protein GI | 121610093 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.845155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGA TCTGGATAGT AGATGACGAC CCCTCGATCC GCTTCGTCCT TGAAAAGGCG
CTGGCCCGCG AAAACCTGCC CACGCGCAGC TTCACACAGC CGCGCGAAGT GCTCGACGCG
CTGACCGACC TCGACACCGG CGACTGCGGC CGGCAAGGCC CGCAGGTCCT GGTGAGCGAC
ATCCGCATGC CCGGCGGCTC GGGCCTGCTG CTGCTGGAAA AAGTGCGCGA GCTGCAACCC
GGTTTGCCGA TCATCATCAT GACCGCGTAC TCCGACCTCG ACAGCGCCGT TTCGGCCTTT
CAGCGCGGCG CATTCGAGTA CCTGCCCAAG CCCTTCGACC TGCCCAAGGC CGTCGCCCTG
ATCCGCCGCG CCGTGGAAGA AAGCCAGCGC GAAGAAGTCA CCGAAGAGCG GCAAGGCGCA
ACGCCCGAAA TACTGGGCCA GGCGCCGGCG ATGCAGGACC TGTTCCGGGC CATCGGCCGG
CTGAGCCAAA GCCAGGTCAC CGTGCTGATC ACCGGCGAAT CCGGCTCGGG CAAAGAACTG
GTGGCGCGCG CGCTGCACAA GCACTCGCCC TGCGCCGACG GCCCCTTCGT GGCCATCAAC
ACCGCAGCCA TCCCCAAAGA CCTGCTCGAG TCCGAACTGT TCGGCCACGA ACGCGGCGCC
TTCACCGGCG CGCAAACCCA GCGGCGCGGC CGCTTCGAGC AGGCCGAGGG CGGCACCCTG
TTCCTGGACG AAATCGGCGA CATGCCGTTC GACCTGCAAA CGCGCCTGTT GCGCGTACTA
TCGGACGGCC AGTTCTACCG CGTGGGCGGC CATGCGGCGC TCAAGGCGCA TGTGCGGGTG
ATCGCCGCCA CCCACCAAGA CCTGGAAAAG CGCGTCAAGG CCGGCAGCTT CCGCGAAGAC
CTGTTCCACC GCCTGAACGT CATCCGCCTG CGCCTGCCCG CGCTGCGCGA GCGGCGTGAA
GACGTGCCCA TGCTCACGCG CCACTTCCTG CAACAAAGCG CCAGACAGTT GGGCGTGGAA
CCCAAACGCA TCGCCGACTC GGCATTGGCG CGGCTGGAGC AATTCGCCTT CCCAGGCAAT
GTGCGCCAGT TGGAGAACAT CTGCCACTGG CTCACCGTCA TGGCGCCGGC CCAGGTGATC
TCGCTGCAAG ACCTGCCCCC GGAAGTGCTG GAGGCGCCTG CGCACCAAGC CGCGCACCAC
CCCCCCGCGC GGATGGAGCA GATCGGCCAC GCCAGCGAGC CGGTGGCGGT GCCGGCAACT
GCCATCTGCC CCCCCCCTGC CGAACCGCAG GAAGCACTGC CCCCGCCTGT GCCCGCCACT
ATGGCGGGCA ACGCGCCGGC AATGCCGGCC TTTGCCGCCA CCAGCCCCCA GCGGGAGAAC
GACGGCCATC GGGCCAGTTG GGAAGAAATA CTGGAAATCG AGGCACAAAA GCTGCTCGCC
GGCGGCCAAT CGCAGCTGTG GGATGCGCTC ACGCGGCGCT TCGAGTCCTG CCTGATCCGC
ACCGCGCTGC ACACCACCCA CGGCCGCCGC ATGGAAGCCG CGCAGCGTCT GGGCATAGGA
CGCAACACCA TCACGCGCAA AATCCAGGAA CTGGGGCTGG ACTCCCCGGA TGAGGCATGA
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| Protein sequence | MKPIWIVDDD PSIRFVLEKA LARENLPTRS FTQPREVLDA LTDLDTGDCG RQGPQVLVSD
IRMPGGSGLL LLEKVRELQP GLPIIIMTAY SDLDSAVSAF QRGAFEYLPK PFDLPKAVAL
IRRAVEESQR EEVTEERQGA TPEILGQAPA MQDLFRAIGR LSQSQVTVLI TGESGSGKEL
VARALHKHSP CADGPFVAIN TAAIPKDLLE SELFGHERGA FTGAQTQRRG RFEQAEGGTL
FLDEIGDMPF DLQTRLLRVL SDGQFYRVGG HAALKAHVRV IAATHQDLEK RVKAGSFRED
LFHRLNVIRL RLPALRERRE DVPMLTRHFL QQSARQLGVE PKRIADSALA RLEQFAFPGN
VRQLENICHW LTVMAPAQVI SLQDLPPEVL EAPAHQAAHH PPARMEQIGH ASEPVAVPAT
AICPPPAEPQ EALPPPVPAT MAGNAPAMPA FAATSPQREN DGHRASWEEI LEIEAQKLLA
GGQSQLWDAL TRRFESCLIR TALHTTHGRR MEAAQRLGIG RNTITRKIQE LGLDSPDEA
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