| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3139 |
|---|
| Symbol | |
|---|
| ID | 4691786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 3490525 |
|---|
| End bp | 3491721 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639850897 |
|---|
| Product | amidohydrolase 3 |
|---|
| Protein accession | YP_997888 |
|---|
| Protein GI | 121610081 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.121806 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCC ACGGGCTGCA TATCCCGGCC GCGCTGCGCG GTTTCGCGGC GGGCGCTGCG
CAGGTGTTCG ACATCACGCT GCGCGGCGAC AAGGTGGCAA CCATCGAGCC GAGCGCCGTG
CAGGCGCCGG CGCGCGGCAT ACTGCTGAGC GCGCTGGTCG AGGCGCATGC GCATATCGAC
AAGAACTACA CGGTGCAGGA GGTGGGCGCG GCGCAGGGCA ATCTGTTTGC GGCCATCGAG
CGGATGGACC AACACCGCGC CGGCTGGAGC GCTGCGGCGC TGCGCCAGCG CATGGAGCGC
GCGCTGCACG AGGCCTGGCG GTCGGGCACG CGCGCGCTGC GCACGCATAT CGACTGGGTG
CAGCCCGAGC CGCCGGCCGC GCTGGCGCTG TTCGAGGCGC TGCGCGACGA ATGGCGCGGG
CGCATCGAAC TGCAATTCGT CTCCCTCACG CCGCTGGACC TGTTCACCGA CCTGGCCGCC
GGCGCGCGCA TTGCGCGCGA AGTCAGGCGC GCCGCTGGCG TGCTGGGCGC TTTCGTCTAC
CGCAACCACG GCATCGCCGG CAAGCTCGGC CGCTTGTTCG ACCTGGCGCA GCAGCATGGG
CTGGGGCTGG ACTTGCATGT CGACGAGGGG CTCGACCCCG ACGCCTGCGG GCTGCGCAGC
ATTGCCGAGC TGGTGCACGC GCGCCATTTC CGGCAGGGCG TGGTCTGCGG CCATTGCTGT
TCGCTGGCGC TACAGGACGA GGCCGTGGCC GATGCCACGC TGGTGCTGTG CGCCCAGGCC
GGCATCCACA TCGTCGCCTT GCCGACCACC AATCTGTATC TGCAAGGCGC CTGGGAGCGC
ACGCCGGTGC CGCGTGGCAT CACGCGCATC CGCGAGGCGG CGGCACGGGG CTTGCGCGCC
AGTCTGGCCA CGGACAATGT GCAGGACGCT TTCTACCCCT ACGGCAGCTA CGACCTGCTG
GAGACTTTTG GCCTGGGCGT GCAATTGGCG CACCTGGCGC CCGCGATCGA ATGGCTCGAT
GCCATCACCA TCAGTCCGGC CAAGGCGCTT GGACTGGCAT GGGATGGCCG CATCGCCCCG
GGCTGCCCCG CCGACCTGGT GCTGCTGGAG GCCAGCGCCG AGCATGAGCT GATCGGTGCG
CGCGGGCGCC GGCGCAGCGT GATTCGCGCC GGGCAGATTC TGGAGCCAAC ACCATGA
|
|---|
| Protein sequence | MKLHGLHIPA ALRGFAAGAA QVFDITLRGD KVATIEPSAV QAPARGILLS ALVEAHAHID
KNYTVQEVGA AQGNLFAAIE RMDQHRAGWS AAALRQRMER ALHEAWRSGT RALRTHIDWV
QPEPPAALAL FEALRDEWRG RIELQFVSLT PLDLFTDLAA GARIAREVRR AAGVLGAFVY
RNHGIAGKLG RLFDLAQQHG LGLDLHVDEG LDPDACGLRS IAELVHARHF RQGVVCGHCC
SLALQDEAVA DATLVLCAQA GIHIVALPTT NLYLQGAWER TPVPRGITRI REAAARGLRA
SLATDNVQDA FYPYGSYDLL ETFGLGVQLA HLAPAIEWLD AITISPAKAL GLAWDGRIAP
GCPADLVLLE ASAEHELIGA RGRRRSVIRA GQILEPTP
|
|---|
| |