Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3125 |
Symbol | |
ID | 4693275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 3474454 |
End bp | 3474792 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639850883 |
Product | histone family protein DNA-binding protein |
Protein accession | YP_997874 |
Protein GI | 121610067 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0598577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00823154 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCCCAAG ATTCCATGAC CCGCTCGGAC CTCGTCGAAG AACTGGCTGC GCGCTTGACG CATCTGACGC GCCATGATGC CGAATCCGCC GTCAAGGCCA TTCTCGACGC CGTGGGCCAG GCCCTGGTGC GGGGGCACCG CATCGAGATC CGGGGCTTTG GCAGCTTCTC GGTCAGTCAC CACCCGCCCC GCATGGGCCG CAACCCCCGC AGCGGCGAAG CGGTCGCGAT TCCGCAAAAG CGTGTGCCGC ACTTCAAACC CGGCAAAGCC TTGCGCGAAG CGGTGGACAA GCGCACCAGC GAAATGCAGG CCGAGGCCCG GGGCGAGACC GAGGCTTGA
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Protein sequence | MPQDSMTRSD LVEELAARLT HLTRHDAESA VKAILDAVGQ ALVRGHRIEI RGFGSFSVSH HPPRMGRNPR SGEAVAIPQK RVPHFKPGKA LREAVDKRTS EMQAEARGET EA
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