| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3121 |
|---|
| Symbol | |
|---|
| ID | 4693265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 3468380 |
|---|
| End bp | 3469477 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639850879 |
|---|
| Product | chorismate mutase |
|---|
| Protein accession | YP_997870 |
|---|
| Protein GI | 121610063 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0293375 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATC CGCAAGCCTC ACCCGACCTG TCCAGCCTGC GCGTGCAGAT CGACCATATC
GACCAGCAAC TGCTCGCGCT GCTGAACCAA AGGGCCTTGG TGGCCGAGCG GGTGGGCGAG
GTCAAAAAGC GCGAAGGCAC GCCCTTTTTT CGCCCCGACC GTGTGGCGCA GGTGATAGAA
AAAATACAGA CCACCAACCC CGGTCCGCTC AAAAGCCCGC ATGTGGCCGC CATCTGGCGC
GAAATCATGT CGGCCTGCCT GGCGCTGGAA TCGCCGCAGC GCGTGGCCGT GCTGGGGCCG
CAAGGCACCT TCTGCGAGCA GGCGGCGATC GGTTTTTTTG GCGGCGCCGC CGACCTGATG
TACTGCGCCA ACTTCGATGA AGTCTTCCAC GCCACGGCCG CCGGCAGCGC CCAATACGGC
GTGGTGGGGG TGGAGAACTC CACCGAAGGC GTGGTCACAC GCTCGCTCGA TCTGTTCCTG
CACACCCCCA CGCATGTGGT GGGCGAAGTC AGCCTGCTGG TGCGCCACAA CCTGCTGCGC
ACCAGCCATT CGCTCGATGG CATCCATGCC GTGCTGGCCC ACCCGCAGGC GCTGGCGCAA
TGCCAGGCCT GGCTGTCCAG GCACCTGCCG CATGCCGAGC GCCGCCCGGT ATCGAGCAAT
GCCGAAGGTG CCCGCCTGGC CACCACCGAC CCGGCCTGGG CCGCCTTGTC GAGCGAGCGG
GCGGCGACGC AATTTGGCCT GCACATCGTG GCCCACGCGA TTCAGGACGA TGCCTACAAC
CGCACGCGCT TTGCCATCAT CTGCCTGCCG CACACGCTGC CGACGCCGCC GCCCTCGGGC
AAGGATTGCA CCAGCCTGGT GGTGTCGGTG CCGAACCGGC CCGGCGCGGT GCATGATCTG
CTGGTGCCGC TCAAGACCCA TGGCGTGTCG ATGACGCGCT TCGAATCCCG CCCGGCCCGC
ACCGGCCAGT GGGAGTATTA CTTCTACATC GACCTCGACG GCCATCCCGC ACAGCCCCCT
GTGGCGCGGG CGCTGGAAGA ACTGCGCAGC CTGTGCGCGT TCTACAAGGT TCTGGGTGCC
TACCCGGTGT CCACCTGA
|
|---|
| Protein sequence | MNHPQASPDL SSLRVQIDHI DQQLLALLNQ RALVAERVGE VKKREGTPFF RPDRVAQVIE
KIQTTNPGPL KSPHVAAIWR EIMSACLALE SPQRVAVLGP QGTFCEQAAI GFFGGAADLM
YCANFDEVFH ATAAGSAQYG VVGVENSTEG VVTRSLDLFL HTPTHVVGEV SLLVRHNLLR
TSHSLDGIHA VLAHPQALAQ CQAWLSRHLP HAERRPVSSN AEGARLATTD PAWAALSSER
AATQFGLHIV AHAIQDDAYN RTRFAIICLP HTLPTPPPSG KDCTSLVVSV PNRPGAVHDL
LVPLKTHGVS MTRFESRPAR TGQWEYYFYI DLDGHPAQPP VARALEELRS LCAFYKVLGA
YPVST
|
|---|
| |