Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3109 |
Symbol | |
ID | 4693755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 3456710 |
End bp | 3457276 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639850868 |
Product | ISRm2011-2 transposase protein |
Protein accession | YP_997859 |
Protein GI | 121610052 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3335] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0367059 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCAAGCGG ATCGGGTTGC ATGGAAGGAA AGCCAGCCAG CACTTGACGC AACAAAGCTT GTGTTCCTTG ATGAGACGGG CACATCCACC AACATGACCC GCACACGAGG CCGTTCGCCG AAGGGACAGC GTTGCATAGC CAGTGTTCCA CATGGTCACC GGAAAATCAC CACCTTCATT GCCGGCTTGC GGGTAAACGC CGTGACCGCC CCAATGGTCT TGGATGGCCC TATGGATGGC GAAGCATTCC TGGCCTATAT ACAGCAATTT CTGTGTCCTA CGCTGCACCC TGGTGATATC GTGATCGCTG ATAATTTGTC CAGCCATAAA GTCTCTGGTG TGCGTGAGGC CATTGAGGGG GTTGGTGCAA CATTGCGTTA TCTTCCGCCT TACTCACCAG ATTTGAACCC TATCGAAAAA TTCTTTTCCA AACTGAAAGC CCTGCTCAGG CAAGCTGAAC AGCGTACTGT CGATGGACTT TGGAATACCA TCGGGCACCT GCTTGATTGT TTTACACCAC AGGAATTGTC CAACTACTTT TCATCTTCTG GATATGTTTC TACTTAA
|
Protein sequence | MQADRVAWKE SQPALDATKL VFLDETGTST NMTRTRGRSP KGQRCIASVP HGHRKITTFI AGLRVNAVTA PMVLDGPMDG EAFLAYIQQF LCPTLHPGDI VIADNLSSHK VSGVREAIEG VGATLRYLPP YSPDLNPIEK FFSKLKALLR QAEQRTVDGL WNTIGHLLDC FTPQELSNYF SSSGYVST
|
| |