Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3089 |
Symbol | |
ID | 4691484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 3439487 |
End bp | 3441406 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639850848 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_997840 |
Protein GI | 121610033 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.345995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0971389 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCACA TCACGCTCCC AGACGGCTCG CAGCGCGCAT TTCCGGGCCC GGTGACGGTG GCTGAAGTGG CGGCATCGAT TGGCCCGGGT CTGGCCAAGG CGGCCTTGGC CGGCAAGATC GGCGACCAGT TGCTCGACAC CAGCCACCGG ATCACGGCCG ACTGCCGGCT GTCGATCATC ACGGACAAGG ACGACGCCGG GCTGGAACTG ATCCGCCACT CCACGGCCCA TTTGCTGGCC TATGCCGTCA AGGAACTATT CCCCGAGGCA CAGGTCACCA TCGGCCCCGT GATCGACAAC GGGTTTTATT ACGACTTTGC GTACCAGCGC CCGTTCACGC CAGATGATTT GGTGGCCATG GAAAAACGCA TGGCCGAGCT TGCCGCCAAA GACGAGCCGG TGCTGCGCCG GGTGCTGCCG CGCGATGCGG CGATCGCCTA TTTCAAGGGC CTGGGGGAAC ACTACAAGGC CGAGATCATT GCCGGCATCC CCGGTGACGA AGAGGTCAGC CTGTACCGGG AAGGCTCTTT CGAGGACCTG TGCCGTGGCC CCCATGTCCC GAGCACGGGC AAGCTGAAGT TCTTCAAACT GATGAAGGTG GCCGGCGCGT ACTGGCGCGG CGACCATCGC AACCAGATGC TGCAGCGTGT ATACGGCACG GCCTGGGCCA GCAAGGAGGC GTTGCAGCAG TACCTGACGA TGCTCGAAGA GGCAGAAAAA CGCGATCACC GCAAGCTCGG CCGCGAGCTC GATCTGTTCC ACATCGACGA GCATTCGCCC GGCACCGTGT TCTGGCATCC CAAGGGCTGG ACGCTGTGGC AGGAGGTCGA GCAGTACATG CGGCGCGTGT ACCGCGACAA CGGCTATCAG GAGGTCAAGG GGCCACAGAT TCTCGACCAG GGCCTGTGGG AGAAAACCGG TCACTGGGAC AAGTACCGCG AGAACATGTT CGTGACCGAA TCGGAAAAGC GCGACTACGC CCTCAAACCG ATGAATTGCC CGGGCCACAT CATCATCTTC AAGCAGGGCA TCAAGAGCTA TCGGGACCTG CCGCTGCGCT TTGGCGAGTT CGGCCAGTGC CACCGCAATG AACCCTCGGG GGGGCTGCAC GGGATCATGC GTGTGCGCGC TTTCACGCAG GACGATGGCC ATATCTTTTG CACTGCACAG CAGATCCAGT CCGAGATCCT GGCCTTCACG GCGCTGGTAC AAAAGGTCTA CCGGGACTTC GGGTTCACGG ACATCATCTA CAAGCTGGCG ACGCGGCCCG AAAAGCACAT CGGCACCGAG GAAAGCTGGG ATCAGGCCGA GCATGCCCTG GCCCAAGGGC TGCGCGCCTC GGGTTGCGAA TTCGAGTATC TGCCGGGCGA GGGCGCGTTC TATGGCCCCA AGGTGGAATA CACGCTCAAG GATGCCCTGG GCCGGCAGTG GCAGTGCGGC ACGATACAGG TCGACCCGAA CATGCCCGAG CGTCTGGATG CCGAATTCGT CGGCGAAGAT GGCGCCCGCC ATCGCCCCAT CATGTTGCAC CGCGCCATTG TCGGCAGCCT GGAGCGCTTC ATCGGGATCT TGCTCGAACA GCACGCAGGC GCCTTGCCCG CCTGGCTCGC GCCGGTGCAA CTGGCGCTGC TCAACATCAC GGAGGCGCAG TCCGACTACT GTCGCGAAAT CGCTGCAAAA ATGCAAAAAG CGCTGTCCCA CCTGGGCCTC AGGCTATTGC TCGATCTGCG CAACGAGAAG ATCACGTATA AAATACGCGA GCATTCGATG CAAAAGCTGC CTTACATCCT GGTCGCAGGC GACAAGGAGA GGGCAGCAGG TGCCGTTGCA GTGCGAGCCC GGGGTCATGG CGACCTCGGT GTCATGTCGG TCGACGCGTT CATCGAACGC ATCGCTGACG AGATTTCCAC CAAAGCCTGA
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Protein sequence | MIHITLPDGS QRAFPGPVTV AEVAASIGPG LAKAALAGKI GDQLLDTSHR ITADCRLSII TDKDDAGLEL IRHSTAHLLA YAVKELFPEA QVTIGPVIDN GFYYDFAYQR PFTPDDLVAM EKRMAELAAK DEPVLRRVLP RDAAIAYFKG LGEHYKAEII AGIPGDEEVS LYREGSFEDL CRGPHVPSTG KLKFFKLMKV AGAYWRGDHR NQMLQRVYGT AWASKEALQQ YLTMLEEAEK RDHRKLGREL DLFHIDEHSP GTVFWHPKGW TLWQEVEQYM RRVYRDNGYQ EVKGPQILDQ GLWEKTGHWD KYRENMFVTE SEKRDYALKP MNCPGHIIIF KQGIKSYRDL PLRFGEFGQC HRNEPSGGLH GIMRVRAFTQ DDGHIFCTAQ QIQSEILAFT ALVQKVYRDF GFTDIIYKLA TRPEKHIGTE ESWDQAEHAL AQGLRASGCE FEYLPGEGAF YGPKVEYTLK DALGRQWQCG TIQVDPNMPE RLDAEFVGED GARHRPIMLH RAIVGSLERF IGILLEQHAG ALPAWLAPVQ LALLNITEAQ SDYCREIAAK MQKALSHLGL RLLLDLRNEK ITYKIREHSM QKLPYILVAG DKERAAGAVA VRARGHGDLG VMSVDAFIER IADEISTKA
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