Gene Veis_3086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3086 
Symbol 
ID4691611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3436789 
End bp3437088 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content59% 
IMG OID639850845 
ProductSWIB/MDM2 domain-containing protein 
Protein accessionYP_997837 
Protein GI121610030 
COG category[B] Chromatin structure and dynamics 
COG ID[COG5531] SWIB-domain-containing proteins implicated in chromatin remodeling 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.275079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.150685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTG CAAAAAAAAC GCCGACAGCG GCAGCCCCCG CAGCCAAGAA ACGCAGCCCC 
AACGCCGCTT TCATGAAGGC TCTCACACCC AGCCCCGCGC TGGCCGCCGT GGTTGGCTCG
GCGCCGCTGC CACGCACGCA AATCATCAGC AAGCTGTGGA TCTACATCAG GGCCAACAAC
CTGCAAGACG CTGCCAACAA GCAAAACATC AACGCCGATG CCAAGCTCAA GGAACTGTTC
GGCAAGCCCC AAGTGTCGAT GTTTGAACTC GCCGGCCTGA TCGGCAAGCA TGTGAAGTAA
 
Protein sequence
MATAKKTPTA AAPAAKKRSP NAAFMKALTP SPALAAVVGS APLPRTQIIS KLWIYIRANN 
LQDAANKQNI NADAKLKELF GKPQVSMFEL AGLIGKHVK