Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3081 |
Symbol | |
ID | 4692498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3428443 |
End bp | 3429543 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639850840 |
Product | hemin-degrading family protein |
Protein accession | YP_997832 |
Protein GI | 121610025 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3720] Putative heme degradation protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0519354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.34634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACGATT CAGTCCAAAC CATTCGGAAC GCTTTCAGCA CATTGCGGCG CAGCAGCAAG GCGCGCCACC GGGATATTGC CGAGCAGCTT TGTCTTTCCG AGGGAGAACT GATCGCCGCG CACGCCGGAA GCGCCAGCGA CGACCCGAAC GTGATTTTGC ATGCCACGCG CTTGCGCCCC GACTGGTCCG GCATCATGGA GTCGCTCGAG CCATTGGGTG AAGCCATGGC CTTGACCCGC AACGCCTCAT GCGTGCATGA AAAGACGGGG GTCTATCGCA ACGCAAGCCA CCAAAACCAT GTGGGACTGG TGCTGGGCGG CGCGATCGAT CTGCGCATCT TCTATCGGCA ATGGGCGCAT GGCTTTGCTG TCATCGAGCA AACGAGGCCA GGAAAGCCAA CAGAGCCAAC AGAGCAGCGC AGCCTTCAAT TCTTTGATGC CGAAGGCACG GCCATCCACA AAGTCTTCCT GAAACCAGGC AGCGATGTGG CGGCCTATAC GCGCCTGGTG GCCCACTTTG CCGCCAGCGA TCAGAGCGCA GGCATCTGCG CACAAACCCC GGCGGCGCGG CCAGCCGAAC TCGCGGATGC ATCCATCGAT GTGACAGGTT TTCATCGGGC ATGGGACTCG CTGCGCGATA CACATGAGTT CTTCGGATTG CTCAAGACCT TTGGCCTGAC ACGAACGCAA GCCCTGCGCC TGGCCGAACC CCGGTATGTC CACAAAGTGG CGGCGGATGA TTGCCAGAGC CTGCTGCATG CGGCGGCGAC CGATGGCGTG TCCATCATGG TGTTTGTCGG CAATCCCGGC ATGATTCAAA TTCACTCCGG GCCTGTCAAA AAGGTGGCTG TCATGGGGCC TTGGCTGAAT GTGCTCGATC CCGGATTCAG CCTGCACCTT CGGGAAGACC ACATTGCCAG CGCCTGGGTC GTCAAGAAAC CCACCGTTGA CGGGCTGGTG ACATCGCTCG AATTGTTCGA TGCCCAAGGC GACACGATGG CGCTGTTCTT TGGTGAGCGC AAGCCCGGCC AGCGTGAGCT GTGCGAGTGG CGTGCCCTGA TCGAAAACCT CCAGCCGGAG CCCCGCCAAT GCGCCGCATA A
|
Protein sequence | MHDSVQTIRN AFSTLRRSSK ARHRDIAEQL CLSEGELIAA HAGSASDDPN VILHATRLRP DWSGIMESLE PLGEAMALTR NASCVHEKTG VYRNASHQNH VGLVLGGAID LRIFYRQWAH GFAVIEQTRP GKPTEPTEQR SLQFFDAEGT AIHKVFLKPG SDVAAYTRLV AHFAASDQSA GICAQTPAAR PAELADASID VTGFHRAWDS LRDTHEFFGL LKTFGLTRTQ ALRLAEPRYV HKVAADDCQS LLHAAATDGV SIMVFVGNPG MIQIHSGPVK KVAVMGPWLN VLDPGFSLHL REDHIASAWV VKKPTVDGLV TSLELFDAQG DTMALFFGER KPGQRELCEW RALIENLQPE PRQCAA
|
| |