Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3079 |
Symbol | |
ID | 4692210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3426489 |
End bp | 3427550 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639850838 |
Product | transport system permease protein |
Protein accession | YP_997830 |
Protein GI | 121610023 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.21025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.33846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGC CCGGCGTCGA TTGGCGCCTT TTTTTGCCAA CCCAACGGGC TCTGCCGGCA GCATGGCTTT TCGGCGCCTT ATTGCTGGGC ATGGCCGTCG CGCTCCAATC CGGTGCCGTG CCGGTGACAG CCCGCGATTG GCTCTCTGCC CTTGGACTTG GCGCGCAGCA GGGCGTACCT GGCGCGGCCC ATGTGCTGTG GAGCATCCGT CTGCCCAGGG CATTTTTCTC GGTGTTGGTG GGCGCCGGCA TGGGCATGGC TGGTGCGTTG ACACAGGGCT TGTTTCGCAA TCCTCTGGCG GACCCGGGGC TTTTGGGCGT GAGCGCGGGG GCGGCTTGTG CGGCTGCGCT CACCATCGTG GTCTTTTCCG GGTTCAACCT GCCGATACCC ATCTCCTGGC GCCCATGGCT TTTGCCCGCC GCCGCTTTTG CTGGCGCATT GACGGTCTGC TTCACGCTCG ACCGCATGGC CCGCTGGATT ACGCCAGGGT CCATCGCCGG CCTGCTGTTG ACAGGCGTGG CGCTGAATGC GTTGGCGGCT GCGGTCATTG GTTTGTGCAC CTACCTTGCC AGCGATGAGC AGTTGCGCAG CATCTCGTTT TGGACCTTGG GCTCGCTGGC TGGCGGCAAT TGGGCACTGG TTGTGCTCTT GGCCTGTTTG CTGCTGCTGG CGTGGTGCCG GGTGCGCCAA CTGATGCGCT CGATGAACGC GCTGGCCCTG GGCGAATCGG CTGCCGCGCA TGTGGGTGTG GATGTTCAGC GCCTGCGCAG CCATGTCATC GTGCTGGTGG CGGTGCTGGC CGGGTTTTCG GTGGCATGGT GCGGAATGAT CGGCTTCATC GGACTGATTG CGCCCCACCT CGTGCGTGTT TGGGTCGGTG CAGACCAGAG GCAGGTCGTA CCGCTGTCCA TGCTGATGGG CGGACTGCTC CTGCTCATGG CCGATACCTT GGCCCGCACG ATCGCCATCC CCGCAGAAAT TCCGGTCGGA ATTTTTACGG CCCTGCTGGG CAGCCCGTTC TTCCTGCTGT TGCTGCGCGG CGCACGGGGC AGGATCGGGT GA
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Protein sequence | MNMPGVDWRL FLPTQRALPA AWLFGALLLG MAVALQSGAV PVTARDWLSA LGLGAQQGVP GAAHVLWSIR LPRAFFSVLV GAGMGMAGAL TQGLFRNPLA DPGLLGVSAG AACAAALTIV VFSGFNLPIP ISWRPWLLPA AAFAGALTVC FTLDRMARWI TPGSIAGLLL TGVALNALAA AVIGLCTYLA SDEQLRSISF WTLGSLAGGN WALVVLLACL LLLAWCRVRQ LMRSMNALAL GESAAAHVGV DVQRLRSHVI VLVAVLAGFS VAWCGMIGFI GLIAPHLVRV WVGADQRQVV PLSMLMGGLL LLMADTLART IAIPAEIPVG IFTALLGSPF FLLLLRGARG RIG
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