| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3058 |
|---|
| Symbol | |
|---|
| ID | 4691597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 3411042 |
|---|
| End bp | 3411659 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639850817 |
|---|
| Product | fumarate hydratase class I beta subunit |
|---|
| Protein accession | YP_997809 |
|---|
| Protein GI | 121610002 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain |
|---|
| TIGRFAM ID | [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0317829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCATC CGCTGGTACT TCCCCTGTCG CGCGACAAAG TGCGCGCACT CGCCGTCGGC
GACATGGTGA CGCTCGATGG TGAAATCACC GTCAGCATCG GCCTGCAAAC GCATCAGCGC
ATGGTGCAGG CAGTGGGCGA TGGCCAGGCG CTGCCGGTCG ATCTGCGCGC GGGCGCTTTT
TTTCACCTCA GCACCTGTGT TCGGGACACC GGGGACGGGC CGCAGCCGCT GTACACGAAC
CCGAGTACCA GCACGCGCTA CAACGCCTGG ATGCCGTCGC TGGTGCGCGG CCTCGACCTG
CGCTTGACCG GCGGCAAGGG GGGGCTCGAC GCGGCCAGCG TGCAGGCGCT GCGCGATACC
GGCTGCGTCT ACCTGTCCTT TCTTGGCGGC GGGGCGCCGT TGTTGTCGCG CGGATTGCGC
GGCCTGGTGT CTTCCCACTG GAACGAATAC ATCTCGCAAT TTCGCTTGCT GACGTTGCGT
GTGGCCGCGT TCGGTCCCGC CACGGTGGCC ATCGATGCGC ACGGCAACAG CCTCTACGAG
CAACTGCGCG GGCAGGCACA AGCCCGCATG CCGCAATTGC TGCAGCGCCT GGACGCGGCC
CGCAAGGCAT CTCGATGA
|
|---|
| Protein sequence | MFHPLVLPLS RDKVRALAVG DMVTLDGEIT VSIGLQTHQR MVQAVGDGQA LPVDLRAGAF
FHLSTCVRDT GDGPQPLYTN PSTSTRYNAW MPSLVRGLDL RLTGGKGGLD AASVQALRDT
GCVYLSFLGG GAPLLSRGLR GLVSSHWNEY ISQFRLLTLR VAAFGPATVA IDAHGNSLYE
QLRGQAQARM PQLLQRLDAA RKASR
|
|---|
| |