Gene Veis_3050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3050 
Symbol 
ID4694666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3403026 
End bp3404222 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content69% 
IMG OID639850809 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_997801 
Protein GI121609994 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.682037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.134859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTTG CCCCCGAGCA CCCGAACTCC AGCGCATTGC CCCTGCGCAG CGGCCCCCAA 
GGCCCGCTCA GTGGTCTGCG GGTGCTCGAT CTGAGCGCCT ACATCGCCGG GCCCTATGGC
TGCGCCTTGC TGGCCGATCA AGGCGCCGAG GTCATCAAGA TCGAGCCGCC CACGGGCGAC
AACCTGCGCC AATACCCCTC GACACTGGCG GCCGAGAGCC GCGCCTTCGT CGGCGTGAAC
CGCAGCAAGA TCGGCATGGT GCTGGACCTC AAGCAGCCCG CCGACCATGC ATTGCTGATG
GCGCTGGTGC GCACGGCCGA TGTGCTGGTG CACAACTTTC GCCCCGGCGT GCCACAGCGC
CTGGGCATTG CGTATGAGCA ACTGCGGCCG CTCAATCCAC GCCTCGTCCA TTGCAGCGTC
ACCGGCTATG GCGAGAGCGG ACCGCTCAAG GACAAGGCCG GCTATGACCA GGTGCTGCAG
ACCATGACCG GCATGTGCAC GCTGCAAGGC AAGCGGGGCC AGCCGCCCGA GATCCTCTAC
GGCTCGGTCG TGGACTACCA CGCATCGGCC CTGGTGGCGG CGGGCGTGGC CTCGGCGCTG
TACGAGCGCG AGCGCAGCGG CCAGGGCCAG CGGGTGGGCA TCTCGCTGCT GCGCACCGCG
CTGGCCATGC AGTCGGCGCG GCTGGTCTGG GCCGAAGGCG AACCCCGGGA CATGGGGCGC
GACATGCGTT CGGGCGGCAT CACCGGCATC CACCCGACCA AGGAGGGCTA TCTCTACATC
TCAGCCAACA CGCCCCATTT CTGGAGCGCG CTGTGTGACA AGGTGGGCCT GCCCGAACTG
GCCGCCAACC AGCGCTACGA CTCGGTGCGC AAACGCGCCC GGCATGTCGC CGAACTCCTG
CCCCGGTTGC ACCAAGCCCT GGCGGCACGC AGCGCGCTCG AATGGGAGGC ACTGTTCGGC
CAGGCCGTGC CCTGCGCCGC AGCGCGCACC ACAGAAGACA TGTTCGATCA CCCGCAGGTC
ATCGCCGAGG ACATGCTGGC CCACTTCACC CACCCGGTGC TGGGCAGCTA CCGGGGCTTC
ACACGCGCGA TCCGCTTCGA GCGCACGCCA GGCCCCGATC CATTCGCTGC GCCCACCCTG
GGCCAGCATA CCGAGGCCAT GCGTGCCGTA GCCGCCACAG CCGCCACAGG CGCCTGA
 
Protein sequence
MPLAPEHPNS SALPLRSGPQ GPLSGLRVLD LSAYIAGPYG CALLADQGAE VIKIEPPTGD 
NLRQYPSTLA AESRAFVGVN RSKIGMVLDL KQPADHALLM ALVRTADVLV HNFRPGVPQR
LGIAYEQLRP LNPRLVHCSV TGYGESGPLK DKAGYDQVLQ TMTGMCTLQG KRGQPPEILY
GSVVDYHASA LVAAGVASAL YERERSGQGQ RVGISLLRTA LAMQSARLVW AEGEPRDMGR
DMRSGGITGI HPTKEGYLYI SANTPHFWSA LCDKVGLPEL AANQRYDSVR KRARHVAELL
PRLHQALAAR SALEWEALFG QAVPCAAART TEDMFDHPQV IAEDMLAHFT HPVLGSYRGF
TRAIRFERTP GPDPFAAPTL GQHTEAMRAV AATAATGA