Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3047 |
Symbol | |
ID | 4693558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3400095 |
End bp | 3400985 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639850806 |
Product | LysR family transcriptional regulator |
Protein accession | YP_997798 |
Protein GI | 121609991 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.229406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCA ATTACCTGCG CAGCTTCTTG CTCGTCGTGG AGTCGGGATC GATGTCCGAG GCGGCCAGGC GACTGGGCCT CACGCCCGCC GCCGTGGCGC AGCAGATGCG CGCGCTCGAG CGCGAACTGC ACGCCTCGCT GTTGGCGCGA TCGGGCCGCA CGGTGCAACC GACCGAGGCC GGCCACAAAC TCGTAGGCCG TGCGCGCGCA TTGCTGCGCG AATGGGGGGA CATACAGGCT TGGGTTGGCA AGGAGCAGAC CGGGGGCGAG TTGGTCCTCG GAACCATCAA CACGGCCCTG CACAGCCTGC TGCCCGATAT CCTGGCGCGC TTCGTGCGCG CCCACCCGGG CGTGCGCGTA GTGCTGCGCT CGGGCACCAC GGCGGCGCTG TACCAGGCGG TGCAAAAGTC CGAGCTCGAC GCCGCAGTGT GCCTGTACCC GCCGTTCACA CTGACCAAGA CCTTCGGCTG GGCCTTGCTG CGGCAAGAAC CTCTGGTGCT GCTGGCGCCC CACCGGCTGG CCGGGCGCGA CCCGCACGAG TTGCTGCGCA CCGAGCCGCT GATCCGCTAC GACCGCAGCC TGGGCGGCGG CAAGCAGGCC GACCGCTACA TGCGCGCAGC GGGCATCACT GCGCAGGAGC GCTTTGAGCT CAGTTCGCTG CTGGCCATTG CGATGATGGT CAGCCAGGGC CTGGGCGTGG CCTTGGTCCC GGATATCGAC TCCCCCCTGC TCGCGGGGCA GCGCGTGGCC AGGATCGCTC TGCCTCTGGA CACCGAGGCG CGGCAATTTG GCGTGCTGTG GCTGCGGACA TCGCCCCGGC TGACCCTGAT CCTGGGCTTG GTGCAATCCG CGAACGCAGT GATGGCCTTG CGCCGGTCAC GCAAGCAATA G
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Protein sequence | METNYLRSFL LVVESGSMSE AARRLGLTPA AVAQQMRALE RELHASLLAR SGRTVQPTEA GHKLVGRARA LLREWGDIQA WVGKEQTGGE LVLGTINTAL HSLLPDILAR FVRAHPGVRV VLRSGTTAAL YQAVQKSELD AAVCLYPPFT LTKTFGWALL RQEPLVLLAP HRLAGRDPHE LLRTEPLIRY DRSLGGGKQA DRYMRAAGIT AQERFELSSL LAIAMMVSQG LGVALVPDID SPLLAGQRVA RIALPLDTEA RQFGVLWLRT SPRLTLILGL VQSANAVMAL RRSRKQ
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