| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3027 |
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| Symbol | |
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| ID | 4690896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 3381358 |
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| End bp | 3382404 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639850785 |
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| Product | nifR3 family TIM-barrel protein |
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| Protein accession | YP_997778 |
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| Protein GI | 121609971 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.362905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATTG GCTCCATTCC TTTGCCGAAC CGGTTGTTCG TTGCCCCGAT GGCGGGCGTG
ACCGACCGTC CGTTTCGCCA ACTGTGCAAG GCGCTGGGGG CGGGGTATGC GGTCAGCGAG
ATGATCACGG CGCGCAAGGA TTTGTGGTCC AGCCTGAAGA CCTCGCGCCG CGCCAACCAT
GACGGGGAGC CGGGGCCGAT TGCGGTGCAG ATTGCCGGCA CCGATGCCGC GATGATGGCC
GAGGCGGCGC TCTACAACAT CGAGCGTGGC GCGCAAATCA TCGACATCAA CATGGGCTGC
CCGGCCAAGA AGGTATGCCG GCAATGGGCC GGCTCGGCGC TGATGCAGGA CGAGGCGCTG
GCCGTCGCGA TAGCCCGGGC GGTGGTGGCG GCCTGTGCGC CCCATCGGGT GCCGGTCACG
CTCAAGATGC GCACCGGCTG GTGCCAGCAG CACAAAAATG CGCCGCAACT GGCGCGGCAG
TTCGAGTCGG TGGGCATTCA AATGCTGACG GTGCATGGCC GCACACGCGA GCAGGGCTAC
GGCGGCCAGG CGGAGTACGA GACCATCGCG GCCGTGAAGG CAGCGGTGGG TGTGCCGGTG
GTGGCCAACG GCGACATCAC CACGCCGGAA AAAGCGCGCG CGGTGCTGGC CGCGACCGGC
GCGGACGCGA TCATGATCGG CCGCGCGGCG CAAGGCCGAC CCTGGATCTT CCGCGAGGTG
GGCCACTTTC TGGCCACCGG CGAGCACCTG GCCCCGCCGC TGGTGGCCGA GTTGCGGCGC
CTGCTGCTGG CGCACCTGCA AGACCATTAC AGCCTGTACG GCGAGCCGAT CGGGGTGCGC
AGTGCGCGCA AGCATATTGC GTGGTACCTG CGCGCGCTGC CCGGCGGCGA GGCGTTCAGG
CAGCATATCA ACACGCTGCA AGACTGCGGC GCGCAGTGGC AGGCGGTGGC CGACCATCTG
GATGCCCTGG GGCAACGGAT GGACCGGCTG CCAGTTGCCA GCGCCATGGC CGCTGCACGA
GAAGAACCCG AGGATTTGGC TGCATGA
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| Protein sequence | MQIGSIPLPN RLFVAPMAGV TDRPFRQLCK ALGAGYAVSE MITARKDLWS SLKTSRRANH
DGEPGPIAVQ IAGTDAAMMA EAALYNIERG AQIIDINMGC PAKKVCRQWA GSALMQDEAL
AVAIARAVVA ACAPHRVPVT LKMRTGWCQQ HKNAPQLARQ FESVGIQMLT VHGRTREQGY
GGQAEYETIA AVKAAVGVPV VANGDITTPE KARAVLAATG ADAIMIGRAA QGRPWIFREV
GHFLATGEHL APPLVAELRR LLLAHLQDHY SLYGEPIGVR SARKHIAWYL RALPGGEAFR
QHINTLQDCG AQWQAVADHL DALGQRMDRL PVASAMAAAR EEPEDLAA
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