Gene Veis_3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3003 
SymbolhppA 
ID4691953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3349856 
End bp3351934 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content67% 
IMG OID639850761 
Productmembrane-bound proton-translocating pyrophosphatase 
Protein accessionYP_997754 
Protein GI121609947 
COG category[C] Energy production and conversion 
COG ID[COG3808] Inorganic pyrophosphatase 
TIGRFAM ID[TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAG GTTCAGCACT GACATCCCCT CTCATCCTGG CCCTGGTCTG CGCCCTGGCT 
GCCGTGGCTT ACGGCATCTG GGCCAGGGGC TGGATTCTTG CCCAAGACCC GGGCAATGCC
CGCATGCAGG AGATCGCGGC CGCCATCCAG GCCGGCGCTG CCGCTTACCT GGCGCGCCAG
TACAAGACCA TTGCCATGGT GGGCCTGGTG CTGGCGGTTT TGATCGGCCT GTTTCTCGAT
ACCACCACGG CCGTCGGCTT TGTCCTGGGG GCCTTGCTCT CGGGCGCCTG TGGTTTCATC
GGCATGAACG TCTCGGTGCG CGCCAATGTG CGCACCGCGC AGGCCGCAAC CGCAGGCATA
GGCCCGGCGC TGACGGTGGC GTTTCGTGGC GGCGCGATCA CCGGCATGCT GGTGGTCGGG
CTGGGCCTGC TCGGCGTGAC CGCCTGTTAC TGGTTTCTGG CCGGCGGCAA CCCCGCGCCC
ACGGGCCAAC TGGCCGGTTT GCTCGATCCG CTGATCGGCT TCGCCTTTGG CTCGTCGCTG
ATTTCCATCT TTGCGCGCCT GGGCGGCGGC ATCTTCACCA AGGGCGCCGA CGTGGGCGCC
GACCTGGTGG GCAAGGTCGA GGCCGGCATC CCCGAAGACG ACCCGCGCAA CCCGGCGGTG
ATCGCCGACA ACGTGGGCGA CAACGTGGGT GACTGCGCGG GCATGGCGGC CGACCTGTTC
GAGACCTATG CCGTGACACT GATCGCCACC ATGGTGCTGG GCGCATTGCT GGTCACCACC
GCTGCGCCCG ATGCCGTGGT CTACCCGCTG GCATTGGGGG CCGTGTCCAT CATCGCCTCG
ATCATCGGCT GCTGCTTCGT CAAAGCCACG CCCGGCATGA GGAACGTGAT GCCCGCGCTA
TACAAGGGCC TGGCGATTGC CGGCATTTTG TCGCTGATCG CGTTCTACTT CGTCACGCTC
TGGATCATGC CGGACAACGC CATCACCGCC ACCGGCAGCC AGTTGCGGCT GTTTGGCGCC
TGCGCCACCG GGCTGGTGTT GACCGCAGCA CTGGTGTGGA TCACCGAGTA CTACACCGGC
ACGCAGTATG CGCCGGTGCA GCATATCGCC CAGGCCTCGA CCACCGGCCA TGGCACGAAC
ATCATCGCCG GCCTGGGCGT GTCGATGCGC TCGACCGCCT GGCCGGTGAT TTTCGTCTGC
CTGGCCATCC TGTCGGCCTA CCAACTCGCC GGCCTGTATG GCATTGCGGT GGCGGCCATG
TCCATGCTGA GCATGGCCGG CATCGTGGTG GCGCTGGACG CCTATGGCCC GATCACCGAC
AACGCCGGCG GCATTGCCGA AATGGCCGAA TTGCCCAGCA GCGTGCGCGA CATCACCGAC
CCGCTCGACG CCGTGGGCAA CACCACCAAG GCCGTGACCA AGGGCTACGC GATCGGCTCT
GCGGGCCTGG CCGCCCTGGT GCTGTTTGCC GACTACACCC ACAAGCTCGA AAGCCATGGC
CGCGCGGTCA GCTTCGAGCT GAGCGACCCG CTGGTGATCG TGGGACTGTT CATCGGCGGC
CTGATCCCCT ACCTGTTCGG CGCCATGGCC ATGCAAGCCG TGGGCCGCGC CGCCGGTGCC
GTGGTGGTCG AAGTGCGCCG CCAGTTCAGC ACCATCGCGG GCATCATGGA CGGCAGCGGC
AAGCCCGAAT ACGGCAAGGC CGTGGACATG CTGACCAGCG CCGCGATCAA GGAGATGGTC
CTGCCCAGCC TGCTGCCGGT GGTCGTGCCC ATTGCCGTCG GTCTGCTGCT CGGCCCGAAG
GCGCTGGGCG GCCTGCTGAT GGGCACCATC GTCACCGGCC TGTTCGTGGC CATCAGCATG
TGCACCGGCG GCGGCGCCTG GGACAACGCC AAGAAGTACA TCGAAGACGG CCACCATGGC
GGCAAGGGCA GCGAGGCGCA CAAGGCGGCC GTGACCGGCG ACACCGTGGG CGACCCCTAC
AAAGACACGG CAGGCCCGGC GATCAACCCG CTGATCAAGA TCATCAACAT CGTGGCGCTG
CTGATCGTGC CGCTGGTGGT CAGATTCCAC GGCGGGTGA
 
Protein sequence
MAAGSALTSP LILALVCALA AVAYGIWARG WILAQDPGNA RMQEIAAAIQ AGAAAYLARQ 
YKTIAMVGLV LAVLIGLFLD TTTAVGFVLG ALLSGACGFI GMNVSVRANV RTAQAATAGI
GPALTVAFRG GAITGMLVVG LGLLGVTACY WFLAGGNPAP TGQLAGLLDP LIGFAFGSSL
ISIFARLGGG IFTKGADVGA DLVGKVEAGI PEDDPRNPAV IADNVGDNVG DCAGMAADLF
ETYAVTLIAT MVLGALLVTT AAPDAVVYPL ALGAVSIIAS IIGCCFVKAT PGMRNVMPAL
YKGLAIAGIL SLIAFYFVTL WIMPDNAITA TGSQLRLFGA CATGLVLTAA LVWITEYYTG
TQYAPVQHIA QASTTGHGTN IIAGLGVSMR STAWPVIFVC LAILSAYQLA GLYGIAVAAM
SMLSMAGIVV ALDAYGPITD NAGGIAEMAE LPSSVRDITD PLDAVGNTTK AVTKGYAIGS
AGLAALVLFA DYTHKLESHG RAVSFELSDP LVIVGLFIGG LIPYLFGAMA MQAVGRAAGA
VVVEVRRQFS TIAGIMDGSG KPEYGKAVDM LTSAAIKEMV LPSLLPVVVP IAVGLLLGPK
ALGGLLMGTI VTGLFVAISM CTGGGAWDNA KKYIEDGHHG GKGSEAHKAA VTGDTVGDPY
KDTAGPAINP LIKIINIVAL LIVPLVVRFH GG