Gene Veis_2974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2974 
Symbol 
ID4695005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3323167 
End bp3323544 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content61% 
IMG OID639850733 
Product4-carboxymuconolactone decarboxylase 
Protein accessionYP_997726 
Protein GI121609919 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR02425] 4-carboxymuconolactone decarboxylase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGG AGCTCTATGA AAAGGGTTTG AAGATTCGCC GCGAAGTGGT GGGTGATGCC 
TATGTCGATG CGTCGCTGAA AAACGCCGAC GAATTCAGCC AGCCGATGCA GGAGCTGGTC
ACCCAGTACT GCTGGGGCGA AGTGTGGTCG CGCCCCGGGA TCGACCGGCG CACCCGCAGC
CTGATGAACC TGTCGATGCT TGCCGCACTG AATCGCCCGG ACGAACTGCA CACGCACATA
CGGGGCGCCA TCAACAACGG CGTGACCAAG GCCGAGATCC GGGAGGTTTT CCTCCAGGTC
GCCGTCTACT GCGGCATGCC GGCAGGACTG GGCAGTTTCA AGATCGCGCG CCAGGTGTTC
AAGGAAATGG GCATCTGA
 
Protein sequence
MNQELYEKGL KIRREVVGDA YVDASLKNAD EFSQPMQELV TQYCWGEVWS RPGIDRRTRS 
LMNLSMLAAL NRPDELHTHI RGAINNGVTK AEIREVFLQV AVYCGMPAGL GSFKIARQVF
KEMGI