| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2954 |
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| Symbol | |
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| ID | 4690403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 3305661 |
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| End bp | 3307499 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639850714 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_997707 |
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| Protein GI | 121609900 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0512853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAAC GATGGTGGTG GGTGGCGCTG GTGCTGGCGC TATGTCCGTT TTGGACCTCT
CAGGCGGGGG CTGGCTTGGT CCGCCTGGTG CCCGGCCAGG GCAGTTACGA CCTGGGCGCC
ATGGCCGATG TGTTGGAGGA CGTGCCGGGC CGGTTGCGGC TCGATGATGT GCTGGCCGGC
GGCAGTGCTG CGTCTGCCTT CAGTTCCCAT ACCGGCCGCC TGTCCAGTTT CGGGTTTACC
AGGTCGACTT TCTGGTTCCG CGTCGAGATC GACAATCCCG CGCCTGCGCC GAGCGACATG
CTGTTGGTGC TGCGCACCCC TTGGCTCGAC TCCGTGCGCT GGTTCCGCCC GGACGGGCAG
GGTGGCTATG TCGAACGACT GCTGGGCGAT CACCTGCCGT TCAAGGCCCG CTCCTATGCC
ACGCCGCAGT TTCTGATCGA CGTGCCGGTG CTGCCCGGCA AGCACAGCTA CTACCTGCGT
CTGGCCAGTG CCGGGGCCTT CATGACGCCC ATCGAGCTGT GGAGCCGCCA GGCTTTCCAT
GACAACGATC GCCTGTGGGC GGCCTACTAC GGGATGTTCT ACGGCATCCT GTGCATCATG
GTGCTCTACA ACGGCTGCAT CTGGGCCTCC ACGCGCGACC GCAGTTACTT CGTTTACTGC
CTGTACCTGG CGGTGTTTTT CCTGATGAAC TTTTCGTACA ACGGCTTTGC GTTCCAGTAT
TTCTGGCCTG AGTCGCCCCG CTGGAGCAAT TGGAGCCAGA CGCATTGGAT CTTCGCGTTC
CAGGGGCTGG CGGTATTGTT CACGATGAAT TTCCTGGAGT CGAAAACCCG CCTGCCGCGC
ATGCACCGGG TCTTGCAAGC CTTCCTGGTG GTGCTGGTCG GCAGTTGGAT CGCGGTCACC
GTCAGCGGCG ATATCGTGGC CTACCACGCG GTGCCGATTT ATTTTATTTT TGGCTGCGCG
CCGCTGATTC TGGCCGCAGG CTTTCTGGCC TTGAGGCCCG GTTATCGGGC GGCGCGCTTT
TTCGTGCTGG CCTTTGTCGC CAGCATCACC GGGAGTTTTT TCACGGCGCT GACCGTGAGC
GGCCTGATTC CCTATACCTT TGCCAATTTC CACGCCTCCG AGTTCGGCCT GCTGGCGGAC
ATGGTGCTGC TCTCGCAGGC CCTGGCCGAT CGCGTCAAGC TGTTGAGCGA ACAGCGCGAT
GCGGCCGAGT TGCGCGAAAT CGAGCAAAAG ATCGCCACCA CGGCCTTGCT GAAACAGGCC
AACGAAGACC TGGAGCGAAT GGTGCTGGAG CGCACTTCGG AGCTGGCCAG GGCGCGCGAC
GAAGCCGAGC ACTTTGCCCG CATCGACATG CTGACGGGCG TGGCCAATCG CCGTTACTTC
GAGGAAGTCG CGACCATGGA ATTTGCCCGG ACGCAGCGTG GCCAGCAAGC CTTGTCGGTC
ATCCTGATCG ATATCGATCT GTTCAAGCAG GTCAACGACC GCTATGGCCA TGCGGCCGGT
GATGCGGTGA TCCGGGCCGT CGCCCGCCTG GCCAAGGAGT CGGTGCGGGA GTCCGATTTC
GTGGCCCGCA TCGGTGGCGA GGAGTTCTCC GTCCTGTTGC CCGGCATAGG GCAGGCGCCG
GCCTTTGCCA CCGCCGAGCG TTTGCGTGAG CGGATTGCCG CCTGTGTGGT CGAGCATGAC
GGACATTCGC TGGGCTTTAC CGCCAGCTTT GGCGTCAGCG AGCAGGTTGC CGACGACCCC
GGGTTCAGCA GCCTGTTGCG CCGGGCAGAC CAGGCCCTGT ACGCTGCCAA GCAGGCGGGG
CGCAACCAGG TGGTGGTGCA GGCGCTCGAG TGGGGGTGA
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| Protein sequence | MGKRWWWVAL VLALCPFWTS QAGAGLVRLV PGQGSYDLGA MADVLEDVPG RLRLDDVLAG
GSAASAFSSH TGRLSSFGFT RSTFWFRVEI DNPAPAPSDM LLVLRTPWLD SVRWFRPDGQ
GGYVERLLGD HLPFKARSYA TPQFLIDVPV LPGKHSYYLR LASAGAFMTP IELWSRQAFH
DNDRLWAAYY GMFYGILCIM VLYNGCIWAS TRDRSYFVYC LYLAVFFLMN FSYNGFAFQY
FWPESPRWSN WSQTHWIFAF QGLAVLFTMN FLESKTRLPR MHRVLQAFLV VLVGSWIAVT
VSGDIVAYHA VPIYFIFGCA PLILAAGFLA LRPGYRAARF FVLAFVASIT GSFFTALTVS
GLIPYTFANF HASEFGLLAD MVLLSQALAD RVKLLSEQRD AAELREIEQK IATTALLKQA
NEDLERMVLE RTSELARARD EAEHFARIDM LTGVANRRYF EEVATMEFAR TQRGQQALSV
ILIDIDLFKQ VNDRYGHAAG DAVIRAVARL AKESVRESDF VARIGGEEFS VLLPGIGQAP
AFATAERLRE RIAACVVEHD GHSLGFTASF GVSEQVADDP GFSSLLRRAD QALYAAKQAG
RNQVVVQALE WG
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