| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2902 |
|---|
| Symbol | |
|---|
| ID | 4690278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 3245522 |
|---|
| End bp | 3246742 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639850663 |
|---|
| Product | aminotransferase, class I and II |
|---|
| Protein accession | YP_997656 |
|---|
| Protein GI | 121609849 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0134054 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCC CGACCATGCC TGACCTGCCT GCCCGTCTGC ACCGGATCCG GCCCTCGCCG
AGTTCCATGG CCAGCCAGCG TGCGCGCGCG CTGCGTGGCC AGGGGCGCGA TGTGCTGGCA
CTGACGGCGG GCGAGCCGGA CTTCGATACG CCGCAGCATA TCCAGGAGGC GGCCCGCCGC
GCGATGGCCA GCGGGCAGAC CCGGTATACC GACGTGGGCG GCACGCCCGA ACTCAAGGAA
GCCATCGCGG GCAAGTTTCG CGCCGAAAAC GGGCTGCATT TTTCTCCCGA CGAGATCATC
GTCGGCGCCG GCGCCAAGCA AGTCATCTTC AATGCGCTGA TGTGCACCGT CCGTGCCGGC
GACGAGGTCA TCGTTCCGGC GCCGTACTGG GTGTCTTATC CGGACATCGT ATGGCTGGCC
GGAGGCATGC CCGTCCATGT CGACTGCCCT GCCAGCCTGG GCTTCAAGCT CCAGCCCGAG
GCGCTGGAGC AGGCCATCAC CGCCCGTACC CGCTGGCTGA TCCTGAATTC GCCGAACAAT
CCGAGCGGCG CCGCATACCT GTTTGCCGAA CTGCAAGCGC TGGCGGAAGT CTTGAAACGC
CATCCGCAGG TCTGGGTCAT GACCGACGAT GTCTATGAAC ATATCCTCTA CGGCGACATG
CCGTTTGCCA GCATCGCCCA GGTCGCGCCC GAACTGAGAG AACGCATCCT GACGGTCAAT
GGCGTCTCCA AAGCCTATGC GATGACAGGC TGGCGCATTG GTTATGGCGC GGCGCCGGCG
CAACTCATCG AGGCGATGGT CAAGCTGCAA TCGCACAGCA CTTCGGGGGC CAGCTCGATC
GGCCAGGCGG CCGCAGTAGC CGCGCTCACC GGCCGCCAGG ACTTCATCGC CACCAACCGC
GCCGTCTTCC GGCAGCGGCG CGACATGGTC GTGGCGGCGC TCGATGCGAT CGATGGCATC
CACTGCCACC TGCCCGATGG CGCGTTTTAT GTTTTCGCCT CCTGCGCCGA CCTGTTCGGA
TTGCGCACCC CCACGGGCCG GGTCATCCGC AGCAGCGACG ATTGGATCGG GCACCTGCTC
GATTCCCAGG ATCTGGCCGC GCTGCAAGGC AGCGCCTACG GCGTCGGGAC GCATTTCCGG
CTCTCCTGTG CCAGCAGTGG CGAGCACTTG CGCGAGGGTT GCCGGCGCAT CGCACGGGCG
CGCGCGCAGC TTGGCCCCTG A
|
|---|
| Protein sequence | MPIPTMPDLP ARLHRIRPSP SSMASQRARA LRGQGRDVLA LTAGEPDFDT PQHIQEAARR
AMASGQTRYT DVGGTPELKE AIAGKFRAEN GLHFSPDEII VGAGAKQVIF NALMCTVRAG
DEVIVPAPYW VSYPDIVWLA GGMPVHVDCP ASLGFKLQPE ALEQAITART RWLILNSPNN
PSGAAYLFAE LQALAEVLKR HPQVWVMTDD VYEHILYGDM PFASIAQVAP ELRERILTVN
GVSKAYAMTG WRIGYGAAPA QLIEAMVKLQ SHSTSGASSI GQAAAVAALT GRQDFIATNR
AVFRQRRDMV VAALDAIDGI HCHLPDGAFY VFASCADLFG LRTPTGRVIR SSDDWIGHLL
DSQDLAALQG SAYGVGTHFR LSCASSGEHL REGCRRIARA RAQLGP
|
|---|
| |