Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2901 |
Symbol | |
ID | 4693049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3244258 |
End bp | 3245235 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639850662 |
Product | LysR family transcriptional regulator |
Protein accession | YP_997655 |
Protein GI | 121609848 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0129461 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATCA CCTTCAAACA GTTGGAGGCA TTTGTCTACA GCGCCAAACT GCGCAGCTTC AGTTCGGCAG CGGCGAAATT GCGCGCCACG CAATCGGCCA TCTCCAAGCG GGTGGCGGAG CTTGAGCAGG AATTCGGGGT GCCGCTGCTG CACCGCACTG CGCAGGGGCT TGAAATGGCC CAGGCCGGCC GCCGGTTGCT GCCGCTGGCC GAAGAGTCGC AAAGGCTGTG GGCGCGCATC GACCATGAGA TGGGCGGCGA CCAGACGCTG CGCGGCACTT TTCGCGTCGG CGTGACCGAG TTGATCGCCA TGACCTGGCT CACGCGCTTC ATTCAACGCT TGCGGCAATT GCACCCCGAG ATGAGCATCG AGCCGGTCGT CGACGCAGGC TTGCTGCTGT TTGCGGGCCT GGAGGCGAAC AAGATCGACA TCGCCATCAT GCCGGGGACT CATTGGGGCA AGAGCTACGA AACGGTCAAG GTGGGGCAGG TCGAAGATCT CTGGGTCGCC AGTCCCAGCC TGAAAATTCC CGACCGGGTG CTCAAGCCGC ACGAGTTCGG TCTCTACCCT GTCCTGGAAC AATCGAGCGG GGCGGCAAAA AACAGGTATT ACGAGGCATG GCGGGCCGAG CACAAGTTCC AGTTCGGCAA GCTATTCCAG ACCAATAGCA CGACGGTGCT GAGGCAATTG ACCATCAATG GATTCGGCAT CAGCCAGTTG GCGCTCGACT ATGTGCGGCC GGACATCGAG GCCGGTCTCT TGCGCATCGT CAAATCCGAT CCCATGCCCC CGCCGATGAT CTATGGCGCC GTGTACCGGA ACGACAATCC CGGCCCGGCC GTCCAGCGCA TTGTCGAGTT GGCGGTGCAA ATGTGCGATT TCTCGGCCGG AGGAAATCCT CGGCGCGCGG CTGGCAACGC GCCGCCCGAC GAACGGCGCC CGGCGCGGCG CCCTGCCCGG CCTGCCCGGC GGCCATGA
|
Protein sequence | MNITFKQLEA FVYSAKLRSF SSAAAKLRAT QSAISKRVAE LEQEFGVPLL HRTAQGLEMA QAGRRLLPLA EESQRLWARI DHEMGGDQTL RGTFRVGVTE LIAMTWLTRF IQRLRQLHPE MSIEPVVDAG LLLFAGLEAN KIDIAIMPGT HWGKSYETVK VGQVEDLWVA SPSLKIPDRV LKPHEFGLYP VLEQSSGAAK NRYYEAWRAE HKFQFGKLFQ TNSTTVLRQL TINGFGISQL ALDYVRPDIE AGLLRIVKSD PMPPPMIYGA VYRNDNPGPA VQRIVELAVQ MCDFSAGGNP RRAAGNAPPD ERRPARRPAR PARRP
|
| |