Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2896 |
Symbol | |
ID | 4692016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3238786 |
End bp | 3240450 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639850657 |
Product | alpha subunit of malonate decarboxylase |
Protein accession | YP_997650 |
Protein GI | 121609843 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.907354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0141944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCA TTTCCCGACC ACCCCCGCAG CGCTGGAACC AACTCGCCGA GGACCGCGCC GAGCGGCTCG CGCGCGCGGC GCATCTGGCC TGCGGCAAGC AGGTGGCGGC AGGGCAACTG GTGGCGCTGC TCGAGGCCCT GCTGCGGCCG GGCGACCGCG TCTGCATCGA AGGCAACAAC CAAAAGCACG CCGACTTCCT GTCGGCGGGC CTGGCCCGGG TGGACCCGGC GCGGGTGCAT GGGCTGCATA TCGTGCAATC GAACATCGCG CTCGCGTCGC ACCTGGACAT CTTCGACAGC GGCATCGCCA CGAAGCTGGA CTTTTGCTAC TCCGGCGAGC AGGGCGTGCG CATGGGCCGG CTGATCAAGC AGGGCCGGAT ACAGGTCGGC GCGATCCACA CCTACCTGGA GCTGTACAGC CGCTACTTTG TCGACCTGAC GCCGCGTGTC GCGTTCGTCG CGGCGCAGAG CGCGGACAGG GCGGGCAATC TCTACACCGG CCCGAACACC GAGGACACCC CTGCGGTGGT GGAGGCGACG GCGTTCAAGA GCGGCATCGT GATTGCGCAG GTCAACGAGC TCGTCGATCG CGTGCCGCGC GTCGATGTGC CGGCCGACTG GGTCTCGTTC GTGCTCGAAG CGCCCAGCCC GCACCATATC GAGCCGATCT TCACGCGCGA CCCGGCGCAG ATCGGCGAGG TGCAGATCCT GATGGCGATG ATGGTCATCA AGGGCCTGTA TGCGCCATAC CAGGTGCGGC GTCTGAACCA TGGCATCGGA TTCGACACTG CGGCGATCGA ACTGATCCTG CCCACCTATG CCGATTCGCT GGGCCTCAAG GGCCGGATCT GCGAATACAT GAGCGTCAAC CCATGCCCCA CGCTGATCCC GGCGATCGAG GCCGGTTTCA TCAAGAGCAT CCACTGCGCC GGCTCCGAGC CGGGCATGGA GCGCTATATC GAGCAGCGCT CGGATATCTT CTTCACCGGC CCCGACGGGT CGATGCGCTC GAACCGCGTC TTTTGCCAGC TCGCCGGCCA TTACGCCGAC CTGTTCATCG GCTCCACGCT GCAGATCGAT CTGGAGGGCA ACTCATCGAC CGCCACGCTC GACCGCATTA CCGGCTTTGG CGGCGCGCCC AACTTCGGCA GCCAGGCGCG TGGCCGCCGG CACGCCAGCC CGGCCTGGCT CAAGGCCGGG GCCGAGAGCG CCGACGGGCA GTCGCGCATG CCGCGTGGGC GCAAGCTGGT AGTGCAATTG GTCCAGAGCT TTCGCGAGAA GATGCAGCCC ACCTTTGTCG AGCGGCTCGA CGCCTGGCGC CTGCAGCAGG ACTTCGATCT GGCCCTGCCG CCGGTGATGG TCTACGGCGA CGACCTGACC CACATCGTCA CCGAGGAAGG CATCGCGCAC CTGCATCGCT GCGCCACGCC CGCCGAGCGC GAGCAGGCGA TTCGCGGCGT TGCCGGCTAC ACGCCGGTGG GCCTGGCGCG CGACCGGCGC GTGGTGGAAA ACCTGCGTGG CCGCGGCATC GTGCAACGCC CCGAAGACCT GGGCATCGAC GCGCGCCTGG CCACGCGCGA CCTGCTGGCC GCCAGGTCGA TCAAGGACTT GGTACGCTGC TCGGGCGGCC TCTACGATCC GCCCAAGCGC TTTCGGCACT GGTGA
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Protein sequence | MNAISRPPPQ RWNQLAEDRA ERLARAAHLA CGKQVAAGQL VALLEALLRP GDRVCIEGNN QKHADFLSAG LARVDPARVH GLHIVQSNIA LASHLDIFDS GIATKLDFCY SGEQGVRMGR LIKQGRIQVG AIHTYLELYS RYFVDLTPRV AFVAAQSADR AGNLYTGPNT EDTPAVVEAT AFKSGIVIAQ VNELVDRVPR VDVPADWVSF VLEAPSPHHI EPIFTRDPAQ IGEVQILMAM MVIKGLYAPY QVRRLNHGIG FDTAAIELIL PTYADSLGLK GRICEYMSVN PCPTLIPAIE AGFIKSIHCA GSEPGMERYI EQRSDIFFTG PDGSMRSNRV FCQLAGHYAD LFIGSTLQID LEGNSSTATL DRITGFGGAP NFGSQARGRR HASPAWLKAG AESADGQSRM PRGRKLVVQL VQSFREKMQP TFVERLDAWR LQQDFDLALP PVMVYGDDLT HIVTEEGIAH LHRCATPAER EQAIRGVAGY TPVGLARDRR VVENLRGRGI VQRPEDLGID ARLATRDLLA ARSIKDLVRC SGGLYDPPKR FRHW
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