Gene Veis_2896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2896 
Symbol 
ID4692016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3238786 
End bp3240450 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content68% 
IMG OID639850657 
Productalpha subunit of malonate decarboxylase 
Protein accessionYP_997650 
Protein GI121609843 
COG category[I] Lipid transport and metabolism 
COG ID[COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase 
TIGRFAM ID[TIGR01110] malonate decarboxylase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.907354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0141944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA TTTCCCGACC ACCCCCGCAG CGCTGGAACC AACTCGCCGA GGACCGCGCC 
GAGCGGCTCG CGCGCGCGGC GCATCTGGCC TGCGGCAAGC AGGTGGCGGC AGGGCAACTG
GTGGCGCTGC TCGAGGCCCT GCTGCGGCCG GGCGACCGCG TCTGCATCGA AGGCAACAAC
CAAAAGCACG CCGACTTCCT GTCGGCGGGC CTGGCCCGGG TGGACCCGGC GCGGGTGCAT
GGGCTGCATA TCGTGCAATC GAACATCGCG CTCGCGTCGC ACCTGGACAT CTTCGACAGC
GGCATCGCCA CGAAGCTGGA CTTTTGCTAC TCCGGCGAGC AGGGCGTGCG CATGGGCCGG
CTGATCAAGC AGGGCCGGAT ACAGGTCGGC GCGATCCACA CCTACCTGGA GCTGTACAGC
CGCTACTTTG TCGACCTGAC GCCGCGTGTC GCGTTCGTCG CGGCGCAGAG CGCGGACAGG
GCGGGCAATC TCTACACCGG CCCGAACACC GAGGACACCC CTGCGGTGGT GGAGGCGACG
GCGTTCAAGA GCGGCATCGT GATTGCGCAG GTCAACGAGC TCGTCGATCG CGTGCCGCGC
GTCGATGTGC CGGCCGACTG GGTCTCGTTC GTGCTCGAAG CGCCCAGCCC GCACCATATC
GAGCCGATCT TCACGCGCGA CCCGGCGCAG ATCGGCGAGG TGCAGATCCT GATGGCGATG
ATGGTCATCA AGGGCCTGTA TGCGCCATAC CAGGTGCGGC GTCTGAACCA TGGCATCGGA
TTCGACACTG CGGCGATCGA ACTGATCCTG CCCACCTATG CCGATTCGCT GGGCCTCAAG
GGCCGGATCT GCGAATACAT GAGCGTCAAC CCATGCCCCA CGCTGATCCC GGCGATCGAG
GCCGGTTTCA TCAAGAGCAT CCACTGCGCC GGCTCCGAGC CGGGCATGGA GCGCTATATC
GAGCAGCGCT CGGATATCTT CTTCACCGGC CCCGACGGGT CGATGCGCTC GAACCGCGTC
TTTTGCCAGC TCGCCGGCCA TTACGCCGAC CTGTTCATCG GCTCCACGCT GCAGATCGAT
CTGGAGGGCA ACTCATCGAC CGCCACGCTC GACCGCATTA CCGGCTTTGG CGGCGCGCCC
AACTTCGGCA GCCAGGCGCG TGGCCGCCGG CACGCCAGCC CGGCCTGGCT CAAGGCCGGG
GCCGAGAGCG CCGACGGGCA GTCGCGCATG CCGCGTGGGC GCAAGCTGGT AGTGCAATTG
GTCCAGAGCT TTCGCGAGAA GATGCAGCCC ACCTTTGTCG AGCGGCTCGA CGCCTGGCGC
CTGCAGCAGG ACTTCGATCT GGCCCTGCCG CCGGTGATGG TCTACGGCGA CGACCTGACC
CACATCGTCA CCGAGGAAGG CATCGCGCAC CTGCATCGCT GCGCCACGCC CGCCGAGCGC
GAGCAGGCGA TTCGCGGCGT TGCCGGCTAC ACGCCGGTGG GCCTGGCGCG CGACCGGCGC
GTGGTGGAAA ACCTGCGTGG CCGCGGCATC GTGCAACGCC CCGAAGACCT GGGCATCGAC
GCGCGCCTGG CCACGCGCGA CCTGCTGGCC GCCAGGTCGA TCAAGGACTT GGTACGCTGC
TCGGGCGGCC TCTACGATCC GCCCAAGCGC TTTCGGCACT GGTGA
 
Protein sequence
MNAISRPPPQ RWNQLAEDRA ERLARAAHLA CGKQVAAGQL VALLEALLRP GDRVCIEGNN 
QKHADFLSAG LARVDPARVH GLHIVQSNIA LASHLDIFDS GIATKLDFCY SGEQGVRMGR
LIKQGRIQVG AIHTYLELYS RYFVDLTPRV AFVAAQSADR AGNLYTGPNT EDTPAVVEAT
AFKSGIVIAQ VNELVDRVPR VDVPADWVSF VLEAPSPHHI EPIFTRDPAQ IGEVQILMAM
MVIKGLYAPY QVRRLNHGIG FDTAAIELIL PTYADSLGLK GRICEYMSVN PCPTLIPAIE
AGFIKSIHCA GSEPGMERYI EQRSDIFFTG PDGSMRSNRV FCQLAGHYAD LFIGSTLQID
LEGNSSTATL DRITGFGGAP NFGSQARGRR HASPAWLKAG AESADGQSRM PRGRKLVVQL
VQSFREKMQP TFVERLDAWR LQQDFDLALP PVMVYGDDLT HIVTEEGIAH LHRCATPAER
EQAIRGVAGY TPVGLARDRR VVENLRGRGI VQRPEDLGID ARLATRDLLA ARSIKDLVRC
SGGLYDPPKR FRHW