| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2881 |
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| Symbol | |
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| ID | 4694256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 3226054 |
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| End bp | 3227775 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639850641 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_997635 |
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| Protein GI | 121609828 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0452476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTAT TTCTCACCCA GAACCTGGCC CCGATCATGT TCGCGGGGCT GATCGTCTTT
TTGCTGCTCG GCTTTCCGGT GGCCTTCAGC CTGGGCGCCT GCGGCCTGTT CTTTGCGTTC
GTCGGCATCG AACTGGGCGT ATTGAATGCG TCCCTGTTGC AGGCGGTGCC GCTGCGGATC
TTCGGCATCA TGGAGAACGA CACCTTGCTG GCGATCCCGT TCTTCACGCT GATGGGGCTG
ATCCTGGAGC GCAGCGGCAT GGCCGAAGAC CTGCTCGAAA CCATTGGCCA ACTGTTCGGC
CCCGTCCGTG GCGGCCTGGC GCTGGCGGTG GTCTTCGTCG GCGCATTGCT GGCCGCCACC
ACTGGCGTGG TGGCGGCGTC GGTGATCTCG ATGGGCCTGA TCTCGCTGCC GATCATGCTG
CGCTACGGCT ATGACCGGCG CCTGGCGGCC GGCGTGATCG CCGCCTCCGG CACGCTGGCG
CAGATCATCC CGCCGTCGCT GGTGCTGATC ATCCTGGCCA ACCAGCTCGG CCGCTCGGTG
GGCGATATGT ACAAGGGCGC CTTCCTGCCC GGCCTGCTGC TGACCGGCTG CTATGCCGGC
TATGTGATCT TGCTGGCGCT GTTCAAACCG CACCTGGTGC CGGCCCTGCC GCCGCAAGCG
CGCTCGCTGC GCGAAGACGA TGGCCGCAGC GGCCTGCCCT CGCTGCTGAC ACTGATGGCC
ATCTGCAGCG CGGCCACCAT CGCCGTGGGC TACCAGATGC CCGCGCTGCA CAGTTGGTGG
TCGGGAGAAA CCGTCGGGCA TGTGGCGCTG GACGAAACCA TCGTCGTCGC GCTGTGCTGC
GGCGTGCTGC TGGCCTTCGT GGCCGCCGGC ATCAACAAAA TCACCGGCCT GGGCCTGCTC
TCGCGCATCG CCGAGCGCGT GACCTTTGTG CTGATCCCGC CGCTGCTGCT GATCTTCCTG
GTGCTGGGCA CCATCTTCCT GGGCGTGGCC ACGCCCACCG AGGGCGGCGC AATGGGCGCG
CTGGGCGCGC TCATCATGGC CATGCTGCGC GGGCGCCTGA GCATGGAACT GCTGCGCCAG
GCGGTGAACA CGACCACCAA GCTGTCGTGC TTCGTGATGT TCATCCTGCT GGGCGCGACG
ATCTTTGGCC TGACCTTCCA GGGCGTAGAC GGCCCGGTGT GGGTCGAACA TCTGCTGACC
GGCCTGCCTG GCGGCCAGTT GGGCTTTTTG ATCGCGGTCA ACGCGATGAT CTTTTTTCTG
GCGTTCTTTC TGGACTTCTT CGAACTGTCG TTCATCGTCG TGCCGCTGCT GGCGCCAGTG
GCCGCCAAAC TGGGCATAGA CCTGATCTGG TTCGGCGTGC TGCTGGGCAT CAACATGCAG
ACCTCGTTCA TGCACCCGCC GTTCGGCTTT GCACTGTTTT ACCTGCGCAG CGTGGCACCC
GCCAACGAGT ACCTGGACAA GGTCAGCCAA AAGATGATCC AGCCAGTGAC CACGATGCAA
ATCTACCGGG GCGCCGTGCC CTTCGTGCTG ATACAACTGC TGATGGTGCT GCTGGTCATC
TGTTTCCCCG GCATCGTCTC CAGCGGCCTG GACAAGGATG TGGTGTATGA CCTGGACAAG
GTGCACATGG ACATCGACGC CCCGCCGCAG AACACCGATG AGACCTCCGC CGATGACCCG
CTGAAAGCCT TCCAGGACTC ATTGACCCAA GAGAAGAAGT AA
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| Protein sequence | MELFLTQNLA PIMFAGLIVF LLLGFPVAFS LGACGLFFAF VGIELGVLNA SLLQAVPLRI
FGIMENDTLL AIPFFTLMGL ILERSGMAED LLETIGQLFG PVRGGLALAV VFVGALLAAT
TGVVAASVIS MGLISLPIML RYGYDRRLAA GVIAASGTLA QIIPPSLVLI ILANQLGRSV
GDMYKGAFLP GLLLTGCYAG YVILLALFKP HLVPALPPQA RSLREDDGRS GLPSLLTLMA
ICSAATIAVG YQMPALHSWW SGETVGHVAL DETIVVALCC GVLLAFVAAG INKITGLGLL
SRIAERVTFV LIPPLLLIFL VLGTIFLGVA TPTEGGAMGA LGALIMAMLR GRLSMELLRQ
AVNTTTKLSC FVMFILLGAT IFGLTFQGVD GPVWVEHLLT GLPGGQLGFL IAVNAMIFFL
AFFLDFFELS FIVVPLLAPV AAKLGIDLIW FGVLLGINMQ TSFMHPPFGF ALFYLRSVAP
ANEYLDKVSQ KMIQPVTTMQ IYRGAVPFVL IQLLMVLLVI CFPGIVSSGL DKDVVYDLDK
VHMDIDAPPQ NTDETSADDP LKAFQDSLTQ EKK
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