Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2873 |
Symbol | |
ID | 4691100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3218000 |
End bp | 3218758 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639850633 |
Product | ABC transporter related |
Protein accession | YP_997627 |
Protein GI | 121609820 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.296726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.770144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTGA TGCTGGAAAT CGCCGACCTG CATGTCGCCT ACGGCCAGGT CGAGGCCGTG CGCGGCGTCA CGCTGTCGCT GCACAGCGGC CAGATCGTCT CGGTGATCGG CCCGAACGGG GCCGGCAAGA CCACCTTGCT GGCCGCCGCG ATGGGGCTAC TGCCGGCGCG CGGCGTGCTG CGGCTCGACG GCCAGGACCT GCACGCGCTC GACGTGCAAA CGCGCGTCGA GCGCGGCCTG TGCCTGGTGC CCGAGCAGCG CGAACTGTTC GGCGCGCTGA GCGTGCTGGA CAACCTGCAA CTGGGCGCCT ATGTGCGCCG CCTGCGCCCC GAAGCCCTGC GCCGCCGCCT GCAATCGGTG TATGAGCGCT TTCCGCGCCT GGCCGAGCGC CGGGCGCAGC GCGCCGACAC GCTCTCGGGC GGCGAGCGGC AAATGCTCGC GCTGGGCCGG GCGCTGATGT CCGCGCCGCG CCTGCTGATG CTCGACGAGC CCAGCCTGGG CCTGGCGCCG CTGATCGTGC GCGAGATACT GGCCATCGTG CGCCAGTTGC GCGCCGACGG CGTATCGATC CTGCTGGTCG AGCAAAACGC GCGCGCCGCG CTGGAAAGCT CCGACCACGG CTACGTGCTG GAGACCGGCG AAATCGCGCT GGCCGGCCCC TCCCGGGCGC TGGCCCAAGA CCCGCGCGTG CAGGCCACCT ACCTGGGCGC CAGCGCCGAC GATGCGCGCC AGCCGGCCGG CGCCGCGCAG CCGCAGTGA
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Protein sequence | MTVMLEIADL HVAYGQVEAV RGVTLSLHSG QIVSVIGPNG AGKTTLLAAA MGLLPARGVL RLDGQDLHAL DVQTRVERGL CLVPEQRELF GALSVLDNLQ LGAYVRRLRP EALRRRLQSV YERFPRLAER RAQRADTLSG GERQMLALGR ALMSAPRLLM LDEPSLGLAP LIVREILAIV RQLRADGVSI LLVEQNARAA LESSDHGYVL ETGEIALAGP SRALAQDPRV QATYLGASAD DARQPAGAAQ PQ
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