Gene Veis_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2873 
Symbol 
ID4691100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3218000 
End bp3218758 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content73% 
IMG OID639850633 
ProductABC transporter related 
Protein accessionYP_997627 
Protein GI121609820 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.296726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.770144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTGA TGCTGGAAAT CGCCGACCTG CATGTCGCCT ACGGCCAGGT CGAGGCCGTG 
CGCGGCGTCA CGCTGTCGCT GCACAGCGGC CAGATCGTCT CGGTGATCGG CCCGAACGGG
GCCGGCAAGA CCACCTTGCT GGCCGCCGCG ATGGGGCTAC TGCCGGCGCG CGGCGTGCTG
CGGCTCGACG GCCAGGACCT GCACGCGCTC GACGTGCAAA CGCGCGTCGA GCGCGGCCTG
TGCCTGGTGC CCGAGCAGCG CGAACTGTTC GGCGCGCTGA GCGTGCTGGA CAACCTGCAA
CTGGGCGCCT ATGTGCGCCG CCTGCGCCCC GAAGCCCTGC GCCGCCGCCT GCAATCGGTG
TATGAGCGCT TTCCGCGCCT GGCCGAGCGC CGGGCGCAGC GCGCCGACAC GCTCTCGGGC
GGCGAGCGGC AAATGCTCGC GCTGGGCCGG GCGCTGATGT CCGCGCCGCG CCTGCTGATG
CTCGACGAGC CCAGCCTGGG CCTGGCGCCG CTGATCGTGC GCGAGATACT GGCCATCGTG
CGCCAGTTGC GCGCCGACGG CGTATCGATC CTGCTGGTCG AGCAAAACGC GCGCGCCGCG
CTGGAAAGCT CCGACCACGG CTACGTGCTG GAGACCGGCG AAATCGCGCT GGCCGGCCCC
TCCCGGGCGC TGGCCCAAGA CCCGCGCGTG CAGGCCACCT ACCTGGGCGC CAGCGCCGAC
GATGCGCGCC AGCCGGCCGG CGCCGCGCAG CCGCAGTGA
 
Protein sequence
MTVMLEIADL HVAYGQVEAV RGVTLSLHSG QIVSVIGPNG AGKTTLLAAA MGLLPARGVL 
RLDGQDLHAL DVQTRVERGL CLVPEQRELF GALSVLDNLQ LGAYVRRLRP EALRRRLQSV
YERFPRLAER RAQRADTLSG GERQMLALGR ALMSAPRLLM LDEPSLGLAP LIVREILAIV
RQLRADGVSI LLVEQNARAA LESSDHGYVL ETGEIALAGP SRALAQDPRV QATYLGASAD
DARQPAGAAQ PQ