| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2827 |
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| Symbol | |
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| ID | 4691466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 3178065 |
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| End bp | 3178643 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639850589 |
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| Product | Tfp pilus assembly protein |
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| Protein accession | YP_997583 |
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| Protein GI | 121609776 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0658085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAAAC GCCATACCGG CAAAGGCCGG GACCACGGCT TCACGTTGAT CGAACTGATG
GTCACCATCG CGCTCGTGGC GGTGATGATG ACGCTCGCGG CACCCAGCTT CGTTCAATAT
CTGCGCAATT CCGAGCTTAC ATCGCTGACC AACACGCTTT TGGCCGCCAT CAATGCCGCC
AAGAGCGAGG CCATGAAATC CGGCAAAAGT GCTTTCGTCC AGCCACTTGG CACGGGATGG
GCAAGCGGTT GGGTCGTCTA TGTCAACCGT GAAAAACAAA GCAACCCCGG CATGGCTACC
ATCGTGCAAA AACAGGAACC CGTGAAGTCT TATTTCAGCA TCGCGGGAAA CGGTACTGCC
GGTGAATCCG GTCCGTATAT CAGGTTCGAT AGTTCCGGGT ACTCTGTCAC CACCGGCGGG
GCGCCTGCAG CTTTGACCCT GACGATCCAA CGGACCGACA CAGACAGTGC GTCGGAGATA
CGGCACATCA TCGTGGCACG GACCGGCAGG GTAAGGGCAT GCAAACCGAA ATTGAGCGCC
AATAACAACA ATGTCGTCAA TGCCGGTCCG GACTGCTAG
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| Protein sequence | MMKRHTGKGR DHGFTLIELM VTIALVAVMM TLAAPSFVQY LRNSELTSLT NTLLAAINAA
KSEAMKSGKS AFVQPLGTGW ASGWVVYVNR EKQSNPGMAT IVQKQEPVKS YFSIAGNGTA
GESGPYIRFD SSGYSVTTGG APAALTLTIQ RTDTDSASEI RHIIVARTGR VRACKPKLSA
NNNNVVNAGP DC
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