Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2826 |
Symbol | |
ID | 4690633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 3177607 |
End bp | 3178068 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639850588 |
Product | Tfp pilus assembly protein |
Protein accession | YP_997582 |
Protein GI | 121609775 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4968] Tfp pilus assembly protein PilE |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0621265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGCCT TTCGAAAATC TTCCCGAGGG TTCACGCTGA TTGAACTCAT GATCACGCTG GCAATCGTGG GGGTGCTCGT TGCCGTCGCT TATCCTGTTT ACACGAACTC GATGATCAAA GGCCGCAGGG CCCAAGGCCG AACAGCGCTG GTGCAACTGT TGCAGCAGCA GGAACGCTAT ATGACCCAGC GCAACAGCTA CCTGGCTTTC ACCACTGCCA AAGAGACAGG CGTTCCAACC CCAAACACGG CCCCATTCAA AACCTTTTCC GGAGACACAT TCGCGGGCTC TTACTACGTA CTCAGTGCAG TTGCCTGTTC TGAAGCTGCG CCGATCACCA CTTGTGTGAA AGTGACAGCC TCTCCGAGAC AAGCCGATCC GGAAGTGGGA GATCTGACGA TGACCAGTAT CGGCGAGAAA AGCTGTACGG GTTCGGTCCC CCGCCTGTGC TGGCCCTCAT GA
|
Protein sequence | MMAFRKSSRG FTLIELMITL AIVGVLVAVA YPVYTNSMIK GRRAQGRTAL VQLLQQQERY MTQRNSYLAF TTAKETGVPT PNTAPFKTFS GDTFAGSYYV LSAVACSEAA PITTCVKVTA SPRQADPEVG DLTMTSIGEK SCTGSVPRLC WPS
|
| |