| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2821 |
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| Symbol | |
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| ID | 4691337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 3169427 |
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| End bp | 3170542 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639850583 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_997577 |
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| Protein GI | 121609770 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.575571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.419507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACA TCATTACCGC AGCCATTACC GAGGCCCTGG ACCTGGCCCA TCAGGGTTTG
TATCGCACTT CACCCAATCC GCGTGTCGGC TGTGTGATTG CCGATGCGGC CGGGGTGGTG
ATCGGCCGCG GCAGCACCGG GCCTGCGGGT GGCGCGCATG CCGAAATCAT GGCCTTGCGC
AATGCCGCAG CCGGCGGGCA TTCGGTGCGT GGCGCTACGG CTTATGTCAC GCTGGAGCCT
TGTTCGCACC ATGGGCGCAC GGGGCCTTGT TGCGATGCGC TGGTGGCTGC GGGCATTGCC
AAGGTGGTGG CGTCGCTGAC CGATCCGAAT CCTTTGGTCG CAGGGCAGGG TTTTGCCCGT
TTGCGTGCCG CCGGCGTGGC GGTGCAGGTC GGTCCGGGCG CGCAGGCCGC GCGCGAGCTG
AATGTGGGTT TTTTCAGCCG GATGCTGCGC CACAGGCCCT GGGTGCGCAT GAAGCTGGCG
GCGTCGCTCG ATGGGGTGAC GGCGCTGGCC GATGGCAGCA GCCAATGGAT CACGGGGCCT
GCTGCGCGTG CCGATGGCCA TGCCTGGCGG GCCAGGGCCT GTGCGCTGCT GACCGGTATC
GGGACGGTGC TGGCCGATGA CCCCCGGCTG GATGTGCGCG CGCTGCACAC CGAGCGGCAG
CCGGCGCTGG TGCTGCTCGA CAGCGCGTTG CGGGTACCGC TGGATGCTTG CATATTCGCA
GCAGACCGTG CAGTGCACCT ATACGCCGCC GCAGAAAATG ATGCCAAGAG GCGGGCGCTG
GAGCAGCGCG GTGCAACGCT GGCCGTGCTG CCCGACAGCC AGGGCCGGGT GGATTTGGCG
GCCATGCTGC ACGACCTGGC ACGCAGGCAG GTCAATGAGT TGCATGTGGA GGCGGGGCAG
CAGCTCAATG GCGCGTTACT GCGCCAAGGG TTGGTCGATG AACTGCTGGT GTACCTGGCG
CCGAAACTGA TCGGGCCGGG CCTGGGCATG GCGCAGTTGG CGCCTTTGGC GGCGCTGTCG
CAGGCGCAGG CGCTGGATTT TCACGGCCTG GAGCGGGTCG GCGAGGATGT GCGCATCCTG
GCGCGCTGGC GCGATCGGGA GCCGTTTTGG GGTTAG
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| Protein sequence | MSDIITAAIT EALDLAHQGL YRTSPNPRVG CVIADAAGVV IGRGSTGPAG GAHAEIMALR
NAAAGGHSVR GATAYVTLEP CSHHGRTGPC CDALVAAGIA KVVASLTDPN PLVAGQGFAR
LRAAGVAVQV GPGAQAAREL NVGFFSRMLR HRPWVRMKLA ASLDGVTALA DGSSQWITGP
AARADGHAWR ARACALLTGI GTVLADDPRL DVRALHTERQ PALVLLDSAL RVPLDACIFA
ADRAVHLYAA AENDAKRRAL EQRGATLAVL PDSQGRVDLA AMLHDLARRQ VNELHVEAGQ
QLNGALLRQG LVDELLVYLA PKLIGPGLGM AQLAPLAALS QAQALDFHGL ERVGEDVRIL
ARWRDREPFW G
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