| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2797 |
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| Symbol | |
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| ID | 4695186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 3142569 |
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| End bp | 3144251 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639850558 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_997553 |
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| Protein GI | 121609746 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.284817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.341611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACCGC ATCTGAACTA CCCTCCGGAC GCCGACCTGA GGAAACTGCT CCGCTTCGAG
CCCGACAGCG GGGCCATCTG GCTCGGCGAG CGCCGCATGG TCCTGCTGCA CACGGCGGCG
CTGAGTGCGT TGCGCCGCGA CCTGATCACC TCGGTCGGCA CCGACCACGC CCGCCGCCTG
CTCACGCGCA TGGGCTACGC CAGCGGTCTG CACGACGCCG GCTTTGCCAA CAAGACCCGG
GGTGACTGCA GCCTGGAAGA CATGTTCCTC GTGGGGCCTC AACTGCACAT GCTCGAAGGC
GCGGCCCGGG TCACGCCACT GCACCTGAAG ATGGACGCGG CTGCGGGCCT GTTCGAGGGC
GAGTTCCGGT GGGACGATTC CTGGGAGGCC CATGCCCACC GCCTGGCCTA CGGCGTGGTG
GACGAGCCGG CCTGCTGGAT CCTGCTGGGC TACGCCAGCG GCTACACCAG CGCGTTCATG
GGCAAGCTGA TCCTGTTCAA GGAAATCCGG TGCGGCGCCT GCGGAGACGA GCACTGCCAC
ATCGTGGGCA AGCCGATCGA CGAATGGCCT GACGGCGCGG CCTACGGCCA ATACTTCGAA
GACGATTCGC TGCTGGACAA GATGGACGCG CTGAGCCAGC AGGTGCAGGC GCTCAAGACC
ACGCTGGAGC CCACGACTTC TGGCGGCATG CTGGTCGGGA ATTCGCCGGC GTTCCAGCAG
GCGCACAATC TCATGCAGCG TGCCGCGCAG ACCCAGGTCA CGGTGCTGCT GACCGGCGAG
ACCGGGGTTG GCAAAGAGCG TTTCGCCCGC GCCCTGCACG CGCACTCCGA CCGCGCCGCG
GGCCCCTTCG TGGCGGTGAA CTGCGCGGCG CTGCCCGCCG AGCTGATCGA GGCCGAGCTG
TTCGGTGTCG AGAAAGGGGC CTACACCGGG GCCCATGCGG CGCGCGCCGG GCGCTTCGAG
CGCGCCGAAG GCGGCACGCT GTTCCTCGAC GAGGTCGGCG ACCTGCCGCT GGCGGCGCAG
GCCAAGCTGC TGCGCGTGCT GCAGGAGGGC GAGATCGAGC GGCTGGGGGC CGAGGCCACG
CGCAAGGTCA ACGTGCGCAT GGTCACCGCG ACCAACGTGG ACCTGGAGGA AGCGGTGGCG
CAGGGGCGAT TCCGGCGCGA CCTGCTGTAC CGGCTCAACG TGTACCCCAT CCGCATCCCG
CCGCTGCGCG AGCGCAGCGC CGACATCGAG CCGCTGGCGC GCCATCTGCT GGCGCGCTTC
ATGGCGGTGC ACAACAAGCG CCTCAGTGGC CTGGGCGAGC GCGCGCTGCA GGCGCTGATG
CGGCACGACT GGCCTGGCAA CGTGCGCGAG CTGGAGAACC TGGTCGAGCG CGGTGTGATC
CTGGCGGCCC AGGGCGGCAC GGTGGAGCTC GAACACCTGT TCCCGAACCA GCCCCAGGAG
CGCCAGGATA GCGTGGACCC CCAGGGCCGG CTGGCCCGGG TCTTGCCTGC CCAAGAGAGC
GAACTCTGCG AGCGCATCGT GGGCAGCGGC CTGCCGCTCG AACAGCTCGA AGCCCAGGTG
CTGGCGCTGG CGGTCGAGCG CAGCGGCGGC AACCTGTCGG GTGCGGCACG CCTGCTGGGC
CTGACGCGGC CGCAACTGGC CTACCGGCTC AAGCGCCAGC AACTGGACGA AGAAACCCCT
TGA
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| Protein sequence | MEPHLNYPPD ADLRKLLRFE PDSGAIWLGE RRMVLLHTAA LSALRRDLIT SVGTDHARRL
LTRMGYASGL HDAGFANKTR GDCSLEDMFL VGPQLHMLEG AARVTPLHLK MDAAAGLFEG
EFRWDDSWEA HAHRLAYGVV DEPACWILLG YASGYTSAFM GKLILFKEIR CGACGDEHCH
IVGKPIDEWP DGAAYGQYFE DDSLLDKMDA LSQQVQALKT TLEPTTSGGM LVGNSPAFQQ
AHNLMQRAAQ TQVTVLLTGE TGVGKERFAR ALHAHSDRAA GPFVAVNCAA LPAELIEAEL
FGVEKGAYTG AHAARAGRFE RAEGGTLFLD EVGDLPLAAQ AKLLRVLQEG EIERLGAEAT
RKVNVRMVTA TNVDLEEAVA QGRFRRDLLY RLNVYPIRIP PLRERSADIE PLARHLLARF
MAVHNKRLSG LGERALQALM RHDWPGNVRE LENLVERGVI LAAQGGTVEL EHLFPNQPQE
RQDSVDPQGR LARVLPAQES ELCERIVGSG LPLEQLEAQV LALAVERSGG NLSGAARLLG
LTRPQLAYRL KRQQLDEETP
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