| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2781 |
|---|
| Symbol | |
|---|
| ID | 4691788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3128816 |
|---|
| End bp | 3129850 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639850542 |
|---|
| Product | 4-hydroxy-2-ketovalerate aldolase |
|---|
| Protein accession | YP_997537 |
|---|
| Protein GI | 121609730 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.018657 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTCA AAGGCAAGCA GATCACCGTG CACGACATGA CGCTGCGCGA CGGCATGCAC
CCCAAGCGCC ACCTGATGAC GCTCGAGCAG ATGAAGACCA TCGCCTGCGG GCTGGACGCC
GCCGGCGTGC CGCTGATCGA AGTCACTCAC GGTGACGGCC TGGGCGGCAG CTCGGTCAAC
TACGGCTTTC CGGCCCACAG CGACGAGCAA TACCTGAGCG CGGTCATCCC GCTGGTGAAG
CAGGCCAAGG TCTCGGCCCT GCTGCTGCCG GGCATAGGCA CCGTGGACCA CCTGAAGATG
GCGCACGGCC TGGGCGTGCA CACCATCCGC GTGGCCACGC ACTGCACCGA GGCCGACGTG
TCCGAGCAGC ACATCCGCTT CGCGCGCAAG CTGGAGATGG ACACCGTGGG CTTCCTGATG
ATGGCGCACA TGGCCAGCCC CGAGAAGCTG CTCGAGCAGG CGAAGCTGAT GGAGGGCTAC
GGCGCCAACT GCATCTACGT GACCGATTCG GCCGGGCATC TGCTGCCCGA GACCGTCAAG
ACCCGCGTGG GCGCCGTGCG CGAGGCACTG AAGCCTGAAA CCGAACTGGG TTTCCACGGC
CACCACAACC TGGCAATGGG CGTGGCCAAC TCGATCGCGG CCATTGAAGC GGGGGCCAAC
CGCATCGACG CGGCGGCGGC CGGCCTCGGC GCGGGCGCGG GCAACACGCC GATGGAGGTG
CTGATCGCGG TGTGCGATCT GATGGGCATA GCGACCGGCG TGGACGTGTT CAAGATCCAG
GACGTGGCTG AGGACTTGGT GGTGCCCATC ATGGACTTCC CGATCCGCAT CGACCGCGAC
GCGCTCACGC TGGGCTACGC GGGCGTCTAC GGCTCCTTCC TGCTGTTCGC CAAACGCGCC
GAACAGAAGT ACGGCGTCCC GGCGCGCGAC ATCCTGGTCG AGATGGGCCG GCGCGGCATG
GTCGGCGGGC AGGAAGACAT GATCGAGGAC ACCGCCATGA CCATGGCGCG CGAACGCGGC
CGGCTTGCCG CCTGA
|
|---|
| Protein sequence | MTLKGKQITV HDMTLRDGMH PKRHLMTLEQ MKTIACGLDA AGVPLIEVTH GDGLGGSSVN
YGFPAHSDEQ YLSAVIPLVK QAKVSALLLP GIGTVDHLKM AHGLGVHTIR VATHCTEADV
SEQHIRFARK LEMDTVGFLM MAHMASPEKL LEQAKLMEGY GANCIYVTDS AGHLLPETVK
TRVGAVREAL KPETELGFHG HHNLAMGVAN SIAAIEAGAN RIDAAAAGLG AGAGNTPMEV
LIAVCDLMGI ATGVDVFKIQ DVAEDLVVPI MDFPIRIDRD ALTLGYAGVY GSFLLFAKRA
EQKYGVPARD ILVEMGRRGM VGGQEDMIED TAMTMARERG RLAA
|
|---|
| |