| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2747 |
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| Symbol | truB |
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| ID | 4695210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 3093131 |
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| End bp | 3094126 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639850511 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_997506 |
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| Protein GI | 121609699 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0741734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.187539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCAG CGTCCCGCAC CCGGGTGCAG CGGCGCCCCG TGCATGGGGT GCTGCTGCTC
GACAAACCGC TCGCCCTGTC GAGCAACCAG GCCCTGCAAA AAGCCAAATG GCTGCTGCGC
GCGGAAAAAG CCGGCCATAC CGGCACGCTC GACCCCTTGG CCACCGGCGT GCTGCCGCTG
TGCTTTGGCG CGGCCACCAA ATTCAGCCAA CTACAGCTCG ATGCCCCCAA GACCTACGAA
GCCATCGCGC TGCCGGGCGT GACCACGAGC ACCGGCGACG CCGAGGGCGC GGTGCTGCAA
CGCTGCGCCG TCGACCCGGC GCAACTGGCG CCGGAGCGCT TGTCGGCCGT GCAGCGGCAG
TTCACCGGCC CGATCAGCCA GTTGCCGCCG ATGCACAGCG CGCTGAAAAA GGATGGCCGG
GCGCTGTACA CCTACGCGCG CGCAGGCATT GCGCTCGAGC GCGCCGCGCG CGCCGTCGTC
ATCCATGCGC TCGAACTATC GCTGGTGCAG CACGCTCCTG CGCAGACAGC CATCAAGATC
GCAGTGACCT GCAGCAAAGG CTGCTACATC CGCACGCTGG CCGAGGACAT CGGCGCCGCG
CTGGGCTGCG GGGCGCACCT GAGCGCGCTG CGCCGCACCG ACAGCGGCGG CATCGGGATC
GAGCGCTGCA TCAGCCTGGA GCGGCTCCAA GCCCTGCCCG AAGCCGAGCG CCTGGCCTGC
CTGCAACCGC CGCAATCGCT GCTGACCCGG CATCTGCGCG TCACGCTCGA CAGCGACAAT
GCAGCGCGCT TTCTGTCCGG CCTGCCGCGC CGTGGGGCCT GGCCCGACGC CCCGGCCGTG
GCCGTGTTTG GCGCCGATCC GCCGGCATTG CTGGGGGTGG GCCATATCGC GGGCGGCTGT
TTGCTGCCCG ACAGATTGCT CAGTGCGCTG GAAATCGCCC AAATCCTGGC AAGCCAGCCG
CAGCGACAGG ACTGCGGCAT ATTGGAAGAA ACATGA
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| Protein sequence | MPPASRTRVQ RRPVHGVLLL DKPLALSSNQ ALQKAKWLLR AEKAGHTGTL DPLATGVLPL
CFGAATKFSQ LQLDAPKTYE AIALPGVTTS TGDAEGAVLQ RCAVDPAQLA PERLSAVQRQ
FTGPISQLPP MHSALKKDGR ALYTYARAGI ALERAARAVV IHALELSLVQ HAPAQTAIKI
AVTCSKGCYI RTLAEDIGAA LGCGAHLSAL RRTDSGGIGI ERCISLERLQ ALPEAERLAC
LQPPQSLLTR HLRVTLDSDN AARFLSGLPR RGAWPDAPAV AVFGADPPAL LGVGHIAGGC
LLPDRLLSAL EIAQILASQP QRQDCGILEE T
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