| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2733 |
|---|
| Symbol | |
|---|
| ID | 4692334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 3080560 |
|---|
| End bp | 3081132 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639850498 |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_997493 |
|---|
| Protein GI | 121609686 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0192428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0812118 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCGC GCAGCCTACG ACAGCTGATC CGTGACGCGA CACTAGTAAG CTCAGGCGCC
ATGCGCGCAT TGCACTGTCT GGCCTGCGCG GCGGCCCTGC TGGTGCTGGG CGGCTGCGGC
ACCACCCCGG CACCTTCACC CTCGCCGGCC TACCCCGTTG CGCCTGCGCA ACTGTCGGCG
GTTGCGCCCG GGCAACTGTC GGACACGCAG GCGCACGACA TCGCCATCCA CGCACTGGGT
CTGGTCGGAA CGCCCTACCG CCATGGCGGC AACACCCCCG AGGCGGGCTT CGATTGCAGC
GGACTGATCG GCTACGTCTA CCGCCACCGC GTAGGCCGGG CACCGCCGCG CACCGTGGCG
CAACTGAGCG CCTGGGGCCA GCCCATTGCC GGCAGCCAAC TGCGCAGCGG CGACCTGGTG
CTGTTCGGCA CCGGACGCAT CCCCTCGCAT GCCGGCATCT ATGTGGGCCA GGGGCGCTTT
GTCCATGCGC CGGCGAGCGG CGGCCAGGTG CGGCTGGACC AACTGCAATC GGGCTACTGG
GCGCAGCAGG GCGCGTCGTT CCGGCGGCTT TGA
|
|---|
| Protein sequence | MAARSLRQLI RDATLVSSGA MRALHCLACA AALLVLGGCG TTPAPSPSPA YPVAPAQLSA
VAPGQLSDTQ AHDIAIHALG LVGTPYRHGG NTPEAGFDCS GLIGYVYRHR VGRAPPRTVA
QLSAWGQPIA GSQLRSGDLV LFGTGRIPSH AGIYVGQGRF VHAPASGGQV RLDQLQSGYW
AQQGASFRRL
|
|---|
| |