Gene Veis_2720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2720 
Symbol 
ID4693042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3065178 
End bp3065981 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content60% 
IMG OID639850485 
ProductABC transporter related 
Protein accessionYP_997480 
Protein GI121609673 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.16627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.230507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG CACTAAGCAT CAACAACATC GAGGTCATTT ACGACCATGT GATTCTGGTT 
CTCAAGGGCG TGTCGCTGGC GGTGCCGGAG GGCAAAATCG TGGCGTTGCT CGGCGCCAAT
GGCGCGGGCA AAAGCACCAC CTTGAAAGCC ATCTCCAATC TGCTGACCGC CGAGCGCGGC
AATGTCACCA AGGGCAGCAT CGCCTTCCGG GGCGAGCGGG TGGACCGGAT GACGCCGAAC
GATCTGGTCC AGCGCGGCGT GATTCAGGTG ATGGAAGGGC GGCATTGCTT CGCCCACCTG
ACGGTGGAAG AAAACCTGCT GACCGGCGCC TACACGCGCC GCATCCGCCA CGCCGAAGTG
AAGCAGGAAC TGGAAAAAAT CTACGCTTAC TTCCCGCGTC TGAAGGTGCG CCGCAAATCA
CAGTCGGGCT ACACCTCTGG CGGCGAACAG CAGATGACGG CGATTGGCCG CGCCATGATG
GCCAAGCCGT CGATGATCCT GCTCGATGAG CCATCCATGG GACTGGCACC GCAGATCGTT
GAAGAAATCT TCGAGATCGT CAGAGACCTC AACACCAGGG AAAAGGTCTC CTTCCTGCTG
GCCGAGCAAA ACACCCTGGT GGCGCTGCGC CATGCCGACT TTGGCTACAT TCTGGAAAAC
GGTCGCGTGG TGATGGAAGG CGCCGCCAGG GAGTTGGCGG ACAATGAAGA TGTCAAGGAG
TTTTACCTCG GCGTGTCAGC GGCGGGGCGC AAGAATTTCC GCGACATGAA GTTTTACCGG
CGTCGCAAAC GATGGCTGGC TTGA
 
Protein sequence
MSTALSINNI EVIYDHVILV LKGVSLAVPE GKIVALLGAN GAGKSTTLKA ISNLLTAERG 
NVTKGSIAFR GERVDRMTPN DLVQRGVIQV MEGRHCFAHL TVEENLLTGA YTRRIRHAEV
KQELEKIYAY FPRLKVRRKS QSGYTSGGEQ QMTAIGRAMM AKPSMILLDE PSMGLAPQIV
EEIFEIVRDL NTREKVSFLL AEQNTLVALR HADFGYILEN GRVVMEGAAR ELADNEDVKE
FYLGVSAAGR KNFRDMKFYR RRKRWLA