Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2696 |
Symbol | |
ID | 4692019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3039099 |
End bp | 3041030 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639850460 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_997456 |
Protein GI | 121609649 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.508218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGAAA CCATCCGCAA GCACTCCAAG ATCGTGATGA TCTTCTTGTT CTTGCTGATC ATTCCGGCTT TTGTGCTGGT CGGCACCGAC CGCAACTACT TCTCCGAAGC CAGCCCCGTG GTCGCGCGGG TCGATGGCCA CGACATCAGC CAGGCCGACT GGGACAGGGC CCACCGCCAG GAGAGCGACC GCATCCGCGC ACAGTCGCCC ACGGTCGACG CCCGGCTGCT GGACTCCCCC CTGGCGCGCT ACGCCACGCT GGAGCGCCTG GTGCGCGAGC GCGTGCTCGA TGCTGCAGCG CAGCAGATGC GCCTGGTGAC CAGCGACGCG CGCCTGATCC GCAGCCTGCA GGAAACCCCC GCGATTGCAG CGCTCAAGCG GGCCGACGGA ACGCTCGATG CCGATGCCTA CCGCGCATTG CTGGTCGGCC AGGGCGTCAC CCCCGAAGTC TTTGAAGCCA ACCTGCGCCG CAACATCGCG GCGGACCAGG TACTCGATGC CGTGCTCAGC ACGGCCTTGG TCGCCAACGC CCAGGCTCGA CTGGCGCTGG ACGCGCTGTA CGAGCGGCGC GACATACAGG TGGCCCGCTT CGACGCCCCG GACTTTGCCG GTCGGGTCTT GCCCACGGAT GCCGACCTGC AAAGCTACTA CGACGCGCAT CCCGCACAGT TCCGGCAGCC CGAACAGGCA ACGGTGGAAT ATCTGGTATT GGACCTGGAC AGCGTGCGCG CCACCATCAC CGTGCCCGAA GACGAACTGC GCAGCTACTA CGACAGCGAC TACCTGCCAC GGATCATGGC CAAGCAAGAG CGGCGCGCCA GCCACATCCT GATCAGCGTC GCCAAGGATG CCCCGGCGGC AGAGCGCGAA AAAGCCAAGG CCCGCGCCAC CGAGCTACTG GCCCAACTGC GCAAGACACC GGCAGACTTT GCCCCACTGG CCAAGCAATC GTCAGACGAC AAAGGCTCCG CCGCCGCCGG AGGCGATCTG AACTTCTTCG CCCGTGGCGC GATGACCAAG CCGTTCGAAG AAGCCGTCTT CGCGCTGAAG AAAGGCCAGA TCAGCGATGT GGTGGAAACC GAATTCGGCT ACCACATCAT CGAACTGACC GACATCAAGA CCCCGCCCCA GCCCGGTTTC GAGGAGGCGC GGGCGGTCAT CGCCGCCGAG TTGGGGCAGC AGCGGGCGCA GCGCCAATTT GCCGAAATGG CCGAATCCTT CAGCAACGCG GTGTACGAGC AGGCCGACAG CCTGCTGCCC GTGGCCGACA AGCTCAAACT CAAGCTGCAA AGCGCCACCA ATGTCAGCCG CACCCCGGCG CCCGGCGCCA AGGGCGCATT GGCCAGCAGC AAATTCCTGC AGGCGCTGTT CGCGCCGGAT ACGCTGCAAA ACAAACGCAA CACCGAAGCC GTGGAAATAG GCCCTCAGCA AATGGCCGCC GGCCGCGTGA CCAGCTACAC CCCTGCCAGC ACCCTGCCAT TGGCGCAGGT GCGCGAACGC GTGCGCAGCC TGTATGTGGC GGAAAAATCG GCAGCACTGG CGCAGCAGGA AGGCCAGGCC AAACTGAGCG CCTGGAAAGC CGACCCCGCC ACGGCCACAG GGCTGGCGGC CGCCACCGAA ATCGCGCGCG GGCAGGGCCA AAACCTGCCG CGCCCGGTGA TCGATGCGGC CCTGCGCACG CCCGCTGACG CGCTGCCCGC ATGGACGGGC GTCGACCTGG GGGCTGCTGG CTACGCGGTG GTCAAGATCA ACCGCGTGCT CGCGCGCCAG GCGCCCGATG CGCAGCGCGC GCAACAGGAG CAGCAGCAGT ACGCGCAGTG GCTGGCGCGG GCCGAGGTCC TGGCCTACTA CGAACTGCTC AAGCAGCGCC TGAAGGTCCG GATCCAGGCG CCACGCCCGC AAGTCGCGGC GCCAGAGATC GCAGAAAATT GA
|
Protein sequence | MFETIRKHSK IVMIFLFLLI IPAFVLVGTD RNYFSEASPV VARVDGHDIS QADWDRAHRQ ESDRIRAQSP TVDARLLDSP LARYATLERL VRERVLDAAA QQMRLVTSDA RLIRSLQETP AIAALKRADG TLDADAYRAL LVGQGVTPEV FEANLRRNIA ADQVLDAVLS TALVANAQAR LALDALYERR DIQVARFDAP DFAGRVLPTD ADLQSYYDAH PAQFRQPEQA TVEYLVLDLD SVRATITVPE DELRSYYDSD YLPRIMAKQE RRASHILISV AKDAPAAERE KAKARATELL AQLRKTPADF APLAKQSSDD KGSAAAGGDL NFFARGAMTK PFEEAVFALK KGQISDVVET EFGYHIIELT DIKTPPQPGF EEARAVIAAE LGQQRAQRQF AEMAESFSNA VYEQADSLLP VADKLKLKLQ SATNVSRTPA PGAKGALASS KFLQALFAPD TLQNKRNTEA VEIGPQQMAA GRVTSYTPAS TLPLAQVRER VRSLYVAEKS AALAQQEGQA KLSAWKADPA TATGLAAATE IARGQGQNLP RPVIDAALRT PADALPAWTG VDLGAAGYAV VKINRVLARQ APDAQRAQQE QQQYAQWLAR AEVLAYYELL KQRLKVRIQA PRPQVAAPEI AEN
|
| |