| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2673 |
|---|
| Symbol | |
|---|
| ID | 4690773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3015501 |
|---|
| End bp | 3016232 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639850436 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_997433 |
|---|
| Protein GI | 121609626 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.888248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGCCG CACCCGGGGT CGCGCTCGTC ACCGGCGCCA GCGCCGGCAT CGGCAAGCAG
ATCTGCGCCG ACCTGCTCGC GCAAGGCTAC GAGGTGCTCG CGCTCGCGCG CCGCAAGGCC
GGAATCGACC ACCCGAGGCT GCACAGCATC GAAGTCGATC TGAGCGATGC CAGCGCGACA
GCGCAGGCCG TGCGCGAATG CGTCGAGCGC TTCGCGCCGA CCACCATCGT CCACAACGCC
GGCGCCATCC GCGCCGCGCC GCTGTCCGAC GTCAAGCTCG ACGACCTCGA CGCCCTGATC
GACCTGCACC TGGGTTGCGC CATCACGCTC GTCCAAGGGG CCTTGCCGGC CATGCGCGCG
CAGCGCTTCG GCCGCGTCGT GCTGATGTCA TCGCGCGCCG TGCTGGGCCT GGCCACGCGC
ACCAGCTACA GCGCCACCAA GGCCGGCATG CTGGGCCTGG CGCGCACCTG GGCGCTGGAG
CTCGCGGCCG ACGGCATCAC GGTGAACGTG GTGGCGCCGG GGCCGATCCG CACCGACATG
TTCTACGACC TGGTCCAGGC CGGCAGCGAC AAGGAACGCG CGCTCGCGGC CTCGGTGCCC
GTCAAGCGCC TGGGCGAAGT GGCCGACGTG GCACGCGCCG TGCGCTTCTT CACCGAACCG
GGCAGCGGCT TCGTCACCGG CCAGGTGCTC TATGTCTGCG GCGGCACCAG CATCGCCAGC
CTGGTGCTCT GA
|
|---|
| Protein sequence | MRAAPGVALV TGASAGIGKQ ICADLLAQGY EVLALARRKA GIDHPRLHSI EVDLSDASAT
AQAVRECVER FAPTTIVHNA GAIRAAPLSD VKLDDLDALI DLHLGCAITL VQGALPAMRA
QRFGRVVLMS SRAVLGLATR TSYSATKAGM LGLARTWALE LAADGITVNV VAPGPIRTDM
FYDLVQAGSD KERALAASVP VKRLGEVADV ARAVRFFTEP GSGFVTGQVL YVCGGTSIAS
LVL
|
|---|
| |