| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2672 |
|---|
| Symbol | |
|---|
| ID | 4693228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3014292 |
|---|
| End bp | 3015446 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639850435 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_997432 |
|---|
| Protein GI | 121609625 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.211064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCC TGCGCCACAT TCACACACTC GCCCTCGCTG CGCTCCTGGG CGCTGCGGGC
GCACAGGCCG CCGATCTGAA AGTCGGCTTC ATCACCTCGC TGTCGGGGCC GGTGTCGTCG
CTCGGCATTG CATACGACAA GGGCATGAAG GCCGCGCTGG CCTACCGCTC GCAGGTGGGG
GGCCACAAGG TGCAGTTGAT CGCGCTCGAC GATGCCTCCG ACCCGTCCAC GGCCGCGCGC
AATGCGCGCA AGCTGATCGA GGAAGACAAG GTCGACGTCA TCATCGGCTC GGCCGGCGCG
CCGGCCACGC TGGCCATTGC CAGCGTGGCG CGCGAGACGA AGACGCCGCT GATCGCCATC
GCCAACGCCG ACCTGCCCGG CGCGGAGGGC GCGTGGATGG TGACATTGCC GCAGCCCGCG
CCATTGATGA TGAGCGCGAT GGTCGAGAAG ATGAAGCAGG CCGGCGTGAA GACGCTGGCC
TACATCGGCT TTTCCGACTC CTGGGGCGAC CTGGTGTACG ACGCGCTCAC CAAGTCGGCG
CCTGCGGCCG GCATCGAAGT GGTGGCCAAC GAGCGCTATG CGCGCAGCGC TTCGTCGGTG
GCCGGACAGG TGCTCAAGAT CGTCGCGCTG CGCCCCGACG CGGTGATCAC CGGCGCCTCG
GGCACGCCCG GCGCGCTGCC ATACCTGGCG CTGGCCGAGC GCGGCTACAA GGGCAAGATC
TACGGCATGC ACTCGCTGAT CAACCCCGAC TTCATCCGTG TCGGCGGCCC GTCGGTCCAA
GGCGTGCAGG TGCCCACGGG GCCGGTGGTG GTGGCCGAGC AACTGCCTGA CACCCACCCG
ATGAAGAAGG TCGCGCTGGA GTTTCGCGCC GCCTACCAAA AGTCCGAAGG CGCTGCGCCC
ACCGACACCT TCTGGGCCTA CAGCTTCGAT GCCTGGACGA TCTACCTCGA TGCCGCGCAG
CGCGCGCTCG CCAGCAAGGC CGAGCCTGGC ACGGCGCAGT TCCGGCTGGC GCTGCGCGAT
GCCATCGTGG GCACCAGGGA GTTGGTCGGC GCGCACAGCG TCTACAACTT CAAGCCGACC
GACCGCTATG GCTCGGACGA GCGCTCGCGC GTCGTCGTCC AGCTCGACAA AGGCCAATGG
AAACTGGTGC CGTAG
|
|---|
| Protein sequence | MKVLRHIHTL ALAALLGAAG AQAADLKVGF ITSLSGPVSS LGIAYDKGMK AALAYRSQVG
GHKVQLIALD DASDPSTAAR NARKLIEEDK VDVIIGSAGA PATLAIASVA RETKTPLIAI
ANADLPGAEG AWMVTLPQPA PLMMSAMVEK MKQAGVKTLA YIGFSDSWGD LVYDALTKSA
PAAGIEVVAN ERYARSASSV AGQVLKIVAL RPDAVITGAS GTPGALPYLA LAERGYKGKI
YGMHSLINPD FIRVGGPSVQ GVQVPTGPVV VAEQLPDTHP MKKVALEFRA AYQKSEGAAP
TDTFWAYSFD AWTIYLDAAQ RALASKAEPG TAQFRLALRD AIVGTRELVG AHSVYNFKPT
DRYGSDERSR VVVQLDKGQW KLVP
|
|---|
| |