Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2652 |
Symbol | |
ID | 4691921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2995064 |
End bp | 2995921 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639850416 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_997413 |
Protein GI | 121609606 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.186137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTCT GCGGCTTCGA TGTCGGCCTG GAACAGCGCC TGTTCCTGAT TGCCGGCCCC TGCGTGATCG AATCCGCGCA ACTGCAAATG GATGTGGCCG GCCAGCTACG GGAGATCACC GCCCGCCTGG GCATGCCGTT CATCTTCAAA AGCAGCTTCG ACAAGGCCAA CCGCAGCTCA GGCAGCAGCT ACCGTGGCCC GGGCCGCGAC AAGGGCCTGG AAATCCTGGC CCGGGTGCGG CGCGAGCTGG CCCTGCCGGT GCTCACCGAC GTGCACACCG AGGACGACAT CGCCGCCGCC GCGCAGGTGG TGGATGTGCT GCAAACCCCG GCCTTCCTGT GCCGCCAGAC GGACTTCATC AGCGCCGCAG CCCGCTGCGG CAAGCCGGTG AACATCAAAA AAGGCCAGTT CCTCGCGCCC CATGAGATGC ACAACGTCAT CGACAAAGCC CGTGCCGCCG CCCGGCAGGC CGGCCTGTCC GAAGACCGCT TCATGGCCTG CGAGCGCGGC GCCAGCTTTG GCTACAACAA CCTGGTCAGC GACATGCGCA GCCTGGCCAT CATGCGCGCC AGCGGCGCCC CCGTGGTGTT CGACGCCACG CACAGCGTGC AACTGCCCGG CAGCCAGGGC AGCCGCAGTG GCGGCCAGCG CGAAATGGTG CCGGTGCTGG CCCGCGCCGC CGTGGCCGCA GGGGTCGCCG GCATCTTCAT GGAAACCCAC CCCGACCCGG ACCGGGCACT GTCGGACGGC CCCAACGCCG TGCCGCTCAA GCATATGCAA GCCCTGCTGG AAACGCTGGT GGCGCTCGAT GGCGTCACCA AGCGCCACGG CTTTCTCGAA AACCGCTTCG GAGCCTGA
|
Protein sequence | MKLCGFDVGL EQRLFLIAGP CVIESAQLQM DVAGQLREIT ARLGMPFIFK SSFDKANRSS GSSYRGPGRD KGLEILARVR RELALPVLTD VHTEDDIAAA AQVVDVLQTP AFLCRQTDFI SAAARCGKPV NIKKGQFLAP HEMHNVIDKA RAAARQAGLS EDRFMACERG ASFGYNNLVS DMRSLAIMRA SGAPVVFDAT HSVQLPGSQG SRSGGQREMV PVLARAAVAA GVAGIFMETH PDPDRALSDG PNAVPLKHMQ ALLETLVALD GVTKRHGFLE NRFGA
|
| |