Gene Veis_2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2652 
Symbol 
ID4691921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2995064 
End bp2995921 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID639850416 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_997413 
Protein GI121609606 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 
TIGRFAM ID[TIGR01362] 3-deoxy-8-phosphooctulonate synthase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.186137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCT GCGGCTTCGA TGTCGGCCTG GAACAGCGCC TGTTCCTGAT TGCCGGCCCC 
TGCGTGATCG AATCCGCGCA ACTGCAAATG GATGTGGCCG GCCAGCTACG GGAGATCACC
GCCCGCCTGG GCATGCCGTT CATCTTCAAA AGCAGCTTCG ACAAGGCCAA CCGCAGCTCA
GGCAGCAGCT ACCGTGGCCC GGGCCGCGAC AAGGGCCTGG AAATCCTGGC CCGGGTGCGG
CGCGAGCTGG CCCTGCCGGT GCTCACCGAC GTGCACACCG AGGACGACAT CGCCGCCGCC
GCGCAGGTGG TGGATGTGCT GCAAACCCCG GCCTTCCTGT GCCGCCAGAC GGACTTCATC
AGCGCCGCAG CCCGCTGCGG CAAGCCGGTG AACATCAAAA AAGGCCAGTT CCTCGCGCCC
CATGAGATGC ACAACGTCAT CGACAAAGCC CGTGCCGCCG CCCGGCAGGC CGGCCTGTCC
GAAGACCGCT TCATGGCCTG CGAGCGCGGC GCCAGCTTTG GCTACAACAA CCTGGTCAGC
GACATGCGCA GCCTGGCCAT CATGCGCGCC AGCGGCGCCC CCGTGGTGTT CGACGCCACG
CACAGCGTGC AACTGCCCGG CAGCCAGGGC AGCCGCAGTG GCGGCCAGCG CGAAATGGTG
CCGGTGCTGG CCCGCGCCGC CGTGGCCGCA GGGGTCGCCG GCATCTTCAT GGAAACCCAC
CCCGACCCGG ACCGGGCACT GTCGGACGGC CCCAACGCCG TGCCGCTCAA GCATATGCAA
GCCCTGCTGG AAACGCTGGT GGCGCTCGAT GGCGTCACCA AGCGCCACGG CTTTCTCGAA
AACCGCTTCG GAGCCTGA
 
Protein sequence
MKLCGFDVGL EQRLFLIAGP CVIESAQLQM DVAGQLREIT ARLGMPFIFK SSFDKANRSS 
GSSYRGPGRD KGLEILARVR RELALPVLTD VHTEDDIAAA AQVVDVLQTP AFLCRQTDFI
SAAARCGKPV NIKKGQFLAP HEMHNVIDKA RAAARQAGLS EDRFMACERG ASFGYNNLVS
DMRSLAIMRA SGAPVVFDAT HSVQLPGSQG SRSGGQREMV PVLARAAVAA GVAGIFMETH
PDPDRALSDG PNAVPLKHMQ ALLETLVALD GVTKRHGFLE NRFGA