| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2624 |
|---|
| Symbol | |
|---|
| ID | 4690694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 2964729 |
|---|
| End bp | 2965196 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639850388 |
|---|
| Product | rRNA large subunit methyltransferase |
|---|
| Protein accession | YP_997385 |
|---|
| Protein GI | 121609578 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1576] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0866518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.117363 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGC TGATCGTCGC CGTCGGGCAG CGGGTGCCTG ATTGGGCGCA GACGGCATGC
AACGACTACG CCAAACGCTT GCCGCCCGAA CTCAAGCTGG AGCTCAAGGC GGTCAAGACC
GAGCCGCGTG CCGGCAAGAC GCTGGCGAGC CTGCTTGCTG CCGAGCGCGG GCGTATCGAG
GCGGCCATCC CGCGCGGCGC GCAGGTGGTG GCGCTGGACG AGCGCGGCAC CCGTCTGACC
ACCCTGGCCT TGGCCGAACG GCTGCGGGGC TGGCAGTTGG TCGGCGACAC GGTGGCGCTG
CTCGTCGGCG GGCCCGACGG GCTGGACCCG GCCTTGCGCC AGGCCGCGCA CGAGCGCATC
CGCCTGTCGG ACCTGACCCT GCCCCACGCT CTGGTGCGTG TGCTGCTCAT CGAGCAGCTC
TACCGCGCCT GGTCGCTCCA TGCCGGGCAC CCGTACCATC GCGAATGA
|
|---|
| Protein sequence | MKLLIVAVGQ RVPDWAQTAC NDYAKRLPPE LKLELKAVKT EPRAGKTLAS LLAAERGRIE
AAIPRGAQVV ALDERGTRLT TLALAERLRG WQLVGDTVAL LVGGPDGLDP ALRQAAHERI
RLSDLTLPHA LVRVLLIEQL YRAWSLHAGH PYHRE
|
|---|
| |