| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2598 |
|---|
| Symbol | |
|---|
| ID | 4691413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2941151 |
|---|
| End bp | 2941822 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639850364 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_997361 |
|---|
| Protein GI | 121609554 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.670046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.181167 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTACA CCTTCCAGTT CGGTTCGGTG TGGGCTGCGC TGCCCCGACT CGCGCAGGGC
GCGCAATTGA CGGTGCTGCT ATCGCTCGCC GCCATCGCGA TCGGGCTGGC CATCGGCGTG
CTGTGCGCGC TCGCGCGGAC CTCGCGCCGC GCCTGGCTGC GCTGGCCCGC TGCGGTCTAC
GTCGAGTCGA TCCGCAACAC GCCTTTCCTG ATTCAGCTGT TTCTCATCTA CTTCGGGCTT
GCGTCGCTGG GCCTGCGGCT CGATCCGATC GATGCGGCGC TCGTCGGCAT GTCCATCAAC
TGCGGCGCGT ATGCAACCGA GATCGTGCGC GCAGGCATCG ACGCCATTGC GGGCGGCCAA
CTCGAGGCGG CGCATGCGCT GGGCTTTCCC GTGCCCGCCA TCGTGCGCCA TGTGATTGTT
TTTCCTGCGC TGCGCGCGGT CTTCCCCGCC CTGGCAAGCC AGTTCCTCCT GGTGATGCTC
GGCTCGGCGG TCGTGTCGAC GATTTCGGTC GAGGAGCTCA CGGGCGTGGC GCATCTCATC
GAAACCGAAA ACTTTCGCCC CTTCGAGGTC TACATCGTCG TGACGGGCAT CTACCTGGCC
ATCGCGTTTT CGCTCAAACT GGTGTTCGCC GCCGTCGAGC GCTTTTACTT TCAGTCGCGG
GGGCGCGCAT GA
|
|---|
| Protein sequence | MDYTFQFGSV WAALPRLAQG AQLTVLLSLA AIAIGLAIGV LCALARTSRR AWLRWPAAVY
VESIRNTPFL IQLFLIYFGL ASLGLRLDPI DAALVGMSIN CGAYATEIVR AGIDAIAGGQ
LEAAHALGFP VPAIVRHVIV FPALRAVFPA LASQFLLVML GSAVVSTISV EELTGVAHLI
ETENFRPFEV YIVVTGIYLA IAFSLKLVFA AVERFYFQSR GRA
|
|---|
| |