| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2591 |
|---|
| Symbol | |
|---|
| ID | 4691084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2931812 |
|---|
| End bp | 2932798 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639850357 |
|---|
| Product | nitrate ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_997354 |
|---|
| Protein GI | 121609547 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01183] nitrate ABC transporter, permease protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0488842 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACAG TTTCAAGATC AGGGCCTGAG CGCCCGGCCA GACAGGAGAT CGCAATGGCC
AGCGCCGTCT TTCAGGCCCC GTTGGATACC GCTCCGGCGG GGACACGCAA CGCTATCGAA
AATGTCGCTG CAGGGGCAGG CACAGGCACA GGCGCAGCCA AACCAAGCGC CGCAGCCCCG
CCCAGGCGCG ACCGGGCCGC CGGCATCCCG CAGCAGTTCT GGATGGCGGT GCTGCCCCCG
CTGTGCGGCC TGGGGCTGCT GCTGGTGCTG TGGTCGCTGG TATCTGCCGG CACCGGCCGC
AGCATTCCCG GCCCCCGGGA AACCTGGGCG CAGGCGCTGG AGGTGTTTGC CCACCCCTTC
TACCGCAATG GCCCCAATGA CCAGGGCCTG GGCTGGAATG TGCTGATGTC GCTGCAACGT
GTGGCCATCG GCTTTGGCAT GGCGGCGCTG GTGGGCATTC CGGCGGGCTT CGTGATCGGG
CGCATGCCCT TTCTTGCGCG CATGTTCAAC CCGCTGATCA GCCTGCTGCG CCCGGTGTCG
CCGCTGGCCT GGCTGCCGCT GGGCCTGCTG GTGTTCAAGG GGGCCAACGC GGCGGCGATC
TGGACCATCT TCATCTGCTC GATCTGGCCG ATGGTCATCA ACACGGCGGT GGGCGTGCAG
CGCGTGCCGC AGGACTATAT GAACGTGGCC CGCGTGCTGA ATCTGTCCGA GTGGCAGATC
GCCACCCGCA TCCTGTTGCC GGCCGTGCTG CCCTATATGC TGACCGGCGT GCGTCTGGCC
GTGGGCACCG CCTGGCTGGT GATCGTCGCG GCCGAGATGC TGACCGGCGG CGTCGGCATC
GGCTTTTGGG TCTGGGACGA GTGGAACAAC CTGAACGTCA AGAACATCAT CATCGCCATC
TTTGTGATCG GCATCGTCGG CCTGGTGCTG GAATACGCGC TCATCCGGCT GGCCAGCGCA
TTCACGTTTG AAGAGGTGAG AGCATGA
|
|---|
| Protein sequence | MPTVSRSGPE RPARQEIAMA SAVFQAPLDT APAGTRNAIE NVAAGAGTGT GAAKPSAAAP
PRRDRAAGIP QQFWMAVLPP LCGLGLLLVL WSLVSAGTGR SIPGPRETWA QALEVFAHPF
YRNGPNDQGL GWNVLMSLQR VAIGFGMAAL VGIPAGFVIG RMPFLARMFN PLISLLRPVS
PLAWLPLGLL VFKGANAAAI WTIFICSIWP MVINTAVGVQ RVPQDYMNVA RVLNLSEWQI
ATRILLPAVL PYMLTGVRLA VGTAWLVIVA AEMLTGGVGI GFWVWDEWNN LNVKNIIIAI
FVIGIVGLVL EYALIRLASA FTFEEVRA
|
|---|
| |