| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2576 |
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| Symbol | |
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| ID | 4691950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 2910668 |
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| End bp | 2912920 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639850342 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_997339 |
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| Protein GI | 121609532 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00352017 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACAGCAG TACCCCGCGA CGACCGGCCC CGGCAAGAAC CGGCAACGCT CGCATCGAGC
ACCGGACATG AGCCGCCAGC AGCAGCAGCA GCAACGACGA CACCAGCCCC GGCAGCGCCT
TCGCCCGGTA TCGACACCGG ATTGGCCTGC GTCGGGTTGA TTGCGCGCTG GCACGGGATT
GCAGCCGATG CCGATCAGTT GGCGCATGAA TTGGCCGTGG TTGGCCGTCC TTCAGAGACC
AGCGACCTGC TGCTGGCCGC CAAGCGCCTG GGGTTGCAAG CCAAGGCCGT GAAGGTGGAT
GCGGCCCGCC TGGCCACGAC GCCGCTGCCC GCCGTGGCCG TTGGACGGCG CGCTGGCGCA
GCGCCGGATT TTTTCATTCT GGCGCGGCAC GATGCACGCG CCGAGGGCGC CCGGGTCCTG
ATCCAATCGC CCAGCGTGGG CCACCCCGAG ACCCTGACGG TGGCGCAACT GCAAGCGCGC
TGGAGCGGCG AGCTGATCTT GTTCACCACG CGCGCGTCGA TGGCCAATGA ACTGGCCCGG
TTCGATTTCA CCTGGTTCAT TCCGGCCATC GTCAAGTACC GCAAGCTGCT GGCGGAGGTT
TTTCTGGTCA GCCTGGTGTT GCAGTTTTTT GCGCTGATCA CGCCGCTGTT CTTCCAGGTG
GTGATGGACA AGGTGTTGGT GCACCGGGGC TTTACCACGC TGGATGTGAT TGCCTTCGGC
TTGACGGTGG TGGTGCTGTT CGAGGTCTTG CTCACCACCT TGCGCAGCTT TGTGTTCGCG
CACACCACCA GCCGCATCGA TGTGGAGTTG GGCGCGCGGC TGTTTCGGCA CCTGCTGGCC
CTGCCGCTGG CATATTTTCA GGCACGCAGA GTGGGCGACT CGGTGGCGCG GGTGCGCGAG
TTGGAGAACA TCCGCGCCTT TGTCACCGGC AGCGCCATCA CCGTGGTGCT CGACTTGCTG
TTCTCGGTGC TGTTCATCGC CGTGATGCTG CACTACAGCG GCTGGCTGAC CCTGATCGTC
GTGCTCTCGC TGCCTTGCTA TGTGATCTTG TCGGCCTTGT TGACCCCGCT GCTGCGCGCG
CGCCTGAACG AGCGCTTTCA CCGCAGCGCG GAGAACCAGT CCTTTTTGGT GGAAACCATC
AGCGGCATCG ACACCGTCAA GGCCCTGGCG CTGGAGCCGC ATTGGACGCG CAAATGGGAT
CAGCAACTGG CCGCCTACGT GTCCGCGAGT TTCAAGACCG TCACCGTCAG CAGCTTTGCC
GGCAGTGGCG TGAGCCTGAT CTCCAAACTG GTGACGGTGG CCACCATGTA TGCCGGCGCC
AGACTGGTCA TAGACAACCA ACTGACCGTC GGCCAGCTGA TCGCCTTCAA CATGCTGGCC
GGCCAGGTGG CGCAGCCGGT GATACGTTTG GCGCAGCTGT GGACGGACTT CCAGCAGACA
GGGATTGCGG TGCAGCGCCT GGGCGACATT TTGAACACGC GCACCGAGGC AGCGGGCCAC
AAGAGCACCG TGCCGGCGCT GGCCGGGCGC ATCACGCTCG ATGCCGTGGT GTTTCGCTAC
CGGCCGGACG GCCCCGAGGT GCTCAAGGAC ATATCGCTGG ACATCGGCGC CGGGGAGGTG
ATCGGCATCG TCGGGCGCTC GGGCTCGGGC AAGAGCACGC TGACCAAACT GATACAGCGT
CTTTACGTTC CCGAGCGCGG CCGGGTGCTG ATCGACGGCA TCGACCTGGC CCTGGCCGAT
GCCAGCTCAT TGCGCCGCCA GATGGGGGTC GTGCTGCAAG AAAACACGCT GTTTGCCCGC
AGCGTGCGCG AGAACATTGC GTTGGCCGAG CCTGGCGCGC CGCTGCAGGC GGTGATCGAA
GCGGCGCGCC TGGCCGGGGC GCATGAGTTC ATCGTGGAAT TGCCCGAAGG CTACGACACC
CTGGTGGGCG AGCATGGCTG CACCTTGTCG GGCGGGCAGC GCCAGCGCAT TGCGATTGCC
CGCGCCCTGA TGAGCGACCC GCGCGTGCTG ATCTTCGACG AAGCCACCAG CGCGCTGGAC
TACGAGAGCG AGCGCGTCAT ACAAGACAAC ATGAAGGCGA TCTGCGCCGG CCGCACGGTG
GTCATCATCG CGCACCGGCT GTCGGCCGTG CGCGCGGCCC ATCGCATCAT CGTGATGGAG
CGCGGACAAA TCGTGGAGAC CGGCACACAC ACCCAATTGC TGGGCTTTGA GGCCGGCCAC
TATGCGCGGC TGCACCGGTT GCAGCAATGC TGA
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| Protein sequence | MTAVPRDDRP RQEPATLASS TGHEPPAAAA ATTTPAPAAP SPGIDTGLAC VGLIARWHGI
AADADQLAHE LAVVGRPSET SDLLLAAKRL GLQAKAVKVD AARLATTPLP AVAVGRRAGA
APDFFILARH DARAEGARVL IQSPSVGHPE TLTVAQLQAR WSGELILFTT RASMANELAR
FDFTWFIPAI VKYRKLLAEV FLVSLVLQFF ALITPLFFQV VMDKVLVHRG FTTLDVIAFG
LTVVVLFEVL LTTLRSFVFA HTTSRIDVEL GARLFRHLLA LPLAYFQARR VGDSVARVRE
LENIRAFVTG SAITVVLDLL FSVLFIAVML HYSGWLTLIV VLSLPCYVIL SALLTPLLRA
RLNERFHRSA ENQSFLVETI SGIDTVKALA LEPHWTRKWD QQLAAYVSAS FKTVTVSSFA
GSGVSLISKL VTVATMYAGA RLVIDNQLTV GQLIAFNMLA GQVAQPVIRL AQLWTDFQQT
GIAVQRLGDI LNTRTEAAGH KSTVPALAGR ITLDAVVFRY RPDGPEVLKD ISLDIGAGEV
IGIVGRSGSG KSTLTKLIQR LYVPERGRVL IDGIDLALAD ASSLRRQMGV VLQENTLFAR
SVRENIALAE PGAPLQAVIE AARLAGAHEF IVELPEGYDT LVGEHGCTLS GGQRQRIAIA
RALMSDPRVL IFDEATSALD YESERVIQDN MKAICAGRTV VIIAHRLSAV RAAHRIIVME
RGQIVETGTH TQLLGFEAGH YARLHRLQQC
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