Gene Veis_2565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2565 
Symbol 
ID4693125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2896287 
End bp2899208 
Gene Length2922 bp 
Protein Length973 aa 
Translation table11 
GC content66% 
IMG OID639850331 
Productankyrin 
Protein accessionYP_997328 
Protein GI121609521 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00388007 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0998723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATGC GTGTGCTTGT CTACAAAGAT CTCGATATCC GCCGTGTCAA GACGGCATTC 
ACCAAAGTGC GCGCTGCGAT CGAAGCGGGC GACCTGCGCA GCGCCGATGT CAAAAAGCTC
GCACCGACGC CGTACTGGCG CGCCAAACTC GATTACGCCA ACCGCCTGTT GTTGCAGTTC
GTGCGCCATG GCCAAGAGAC CGTCTGCTTG GCGCTGGAGG TGATCGAAAA TCACGCTTAC
GACAAGTCGC GCTTTCTGCG CGGCGCCAGC ATCGACGAAT CGAAGATCGA GCGCGAGCCT
GTGGTCGCCA ATCCTGCCGC GCCCGACGGC AAGGCCGACA GCATGTTGCA GTTGCGCTGG
ATGCATCCGA GCCGGGCGGA GTTCGAACTG CTCGACAAGC CCATCGTTTT TGACGACGCC
CAAGAGGCGG TGCGCCGCTT GCCGGCGCCG GTGGTCGTCG TCGGCTCGGC GGGTTCGGGC
AAGACTGCCG TCACGCTGGC CAAGCTGCGC GAGGCCGAAG GCCATGTCTT GTACGTCACG
CAGTCGGCCT ATCTGGCGCA GTCGGCGCGC GCGCTCTACG ATGCCCATGG CTACGAGAAT
GCGGCGCAGG AGGTGGAGTT TCTGAGCTAC CGCGAATTCG TCGAGACTTT GCGCGTGCCG
GCTGGCCGCG AGGTGACATT CACGGCCTTT TGCAACTGGT TCGACCGGCA TCGCCAGACG
CTGCGCAGCC AGTTGGGCGA TCTCGATGCG CATGCCTTGT TCGAGGAGTT CCGGGGCGTG
CTTGGCGCCA GCGCGCAAGG CCCGCTCGAT CTGCCGGCAT ACCTGGCTTT GGGGCCGCGC
CAGTCCTTGC TCGCAGCCGC CGAGCGGGAG GCGGCGCACA AGCTCTTCGC ACGCTACCGC
CAGTGGTTGC AGGAGTCGCA ACTGTTCGAC TTGAACCTGG TGGCCCATGA ATGGCAGCGC
TTGGCCGCGC CGAACTACGA CTTCGTGGTG ATCGATGAGG TGCAGGACCT GACCAATGTG
CAACTCGCGC TGGTGCTGGC CTGTCTGAAG CGGCCCGGGC AATTCCTGCT GTGCGGCGAC
TCCAACCAGA TCGTCCATCC CAACTTCTTC TCCTGGGCGG CCGTGCGCAC GCTGTTCTGG
CACGGCCTGG CGGGCGAGGC GGCGCAGCGC CAGGCATTGT CGGTGTTGCA GGCGAATTTT
CGCAACACGC GCGCGGTCAC CGATCTGGCC AACGCCTTGC TCAAGATCAA GCAGGCGCGC
TTTGGCTCGA TCGACAAGGA GAGCAATTTC CTGGTCGAGA GCGCTTCGCC GCAAAGCGGC
CAGGTGCGCC TGCTGCCCAC GCACACGGCC ACGCTGCGCG ATCTGGATGC GCAAACCAGG
GCCTCGGTGC AGCATGCGAT CATCGTGCTG CGCGATGAAG ACAAGCCGGC GGCGCGCGAG
CATTTCCGCT CTCCGCTGGT GTTCTCGGTG CACGAGGCCA AGGGCCTGGA GTATCCGCAT
GTGATCCTCT ACACGCTGGT GTCCGGCCAG CGCGCCGCCT ACGCCGAGGT CTGCGATGGC
GTCGCCCAGG CCGACCTGCA AGTCGAGCAA CTGGCCTACA GCCGCGCCCG CGACAAGGGC
GACAAGTCGC TCGAGCTGTA CAAGTTCTAC GTCAACGCGC TGTACGTGGC GATGACGCGC
GCGGTTGCCA CCTTGGTGCT GGTCGAGTCC GACACCAGCC ACCCCTTGCT GGCCCTGCTC
GGTCTGCAAG TCGCCGAGAC CTCGGCGGCC CGCAGCGCAA CGCCGGTGCA GACCTCGACA
CGCGACGAAT GGGCGCAGGA AGCGCGCAAG CTCGAACTGC AAGGCAAAGA GGAGCAGGCG
CGCGCCATCC GCGAAACCTT CCTGCAAACC AAACCGGTGC CGTGGACGCC ATGGTCCGAA
GTCGCGATGC GCGAATATCT GCCCCGCGCA CTCGACCGCA CGCAGCCGTC GAACAAACCC
CGCCAGGCCC TGCTGGACTA CGCGCTGTGG CATGGGCAGC AGGTCTGGAT CGGACAACTG
GCAAAACAGG CACAGTTTGC GCCAGCGCTG CGTCTGGCAC CGGGCGGCGA CCTCGACAGG
GCGGTCGCTT GGCGCGAGAC CGCCCTGCTG CGCCAGCGCC ACTTGCAGCC CTATGCCGCG
CGCAATTTCA AGGACTTGCT GCGCCAGTGC GATCAGTACG GCGTCGACCA CCGCGGCCCC
ACCGGCGCCA CCCCGCTGAT GATGGCCGCG CGCGCCGGCC ACCTGGCCTT GGTCGAGGCG
CTGTTGGAGC GCGCCGCCAA CCCGTTGCTG ACAGACGAAT TCGGTCATAC GCCGTGGCTC
GCGGCACTGA ACCGGGCGAT GGAAGATGCG CCATTCGCGC AGCAGTCGAT CGGCATGCTG
TTTGACCGCA TCGCGCCGCC GGTGCTGGAT GTGCAAACCG ATGCCCGCTT GGTGCGGCTG
GAGCGCCATC AGGCCGAGTA TTGGATCCTG AGCCTGATGC TGGCCGGCCT CAAGACGCAG
TGCACGATGT GCGTCAAGCG TCCATACAGT CCGTACCGAT GCGCCGATGG TTTCTTTGCC
GAGGAACTCG GCACGACCTT GGTCTGTTTG CCCGAGTACC TGTGGAAAGC ACAGCGGCAC
AAACGCAGCT ACCTCAACCA GGTGCTGGCG CGCGCCGAGA TCAACAGCAC CTATCTGCCA
GCGCGCCGCC TGTGGGCCAG AACCACCAAC GGCCACTACC TGCCCAACCC GCAATTGCAA
CTGCGCACCC ATGCCGACGG TGACGCGCCG ACATGGCGCC CGGTGTATGA GGTGCTGAAT
CTGGCCTGGG TGAATGACGG CACCTCCCAT TCTGCCCCCG ACTTCGCTGG CGCCGGGTGG
TCGCTGCGGC CCCCCGTGGC GGCGGCGGCG TCGCCAACGT AG
 
Protein sequence
MPMRVLVYKD LDIRRVKTAF TKVRAAIEAG DLRSADVKKL APTPYWRAKL DYANRLLLQF 
VRHGQETVCL ALEVIENHAY DKSRFLRGAS IDESKIEREP VVANPAAPDG KADSMLQLRW
MHPSRAEFEL LDKPIVFDDA QEAVRRLPAP VVVVGSAGSG KTAVTLAKLR EAEGHVLYVT
QSAYLAQSAR ALYDAHGYEN AAQEVEFLSY REFVETLRVP AGREVTFTAF CNWFDRHRQT
LRSQLGDLDA HALFEEFRGV LGASAQGPLD LPAYLALGPR QSLLAAAERE AAHKLFARYR
QWLQESQLFD LNLVAHEWQR LAAPNYDFVV IDEVQDLTNV QLALVLACLK RPGQFLLCGD
SNQIVHPNFF SWAAVRTLFW HGLAGEAAQR QALSVLQANF RNTRAVTDLA NALLKIKQAR
FGSIDKESNF LVESASPQSG QVRLLPTHTA TLRDLDAQTR ASVQHAIIVL RDEDKPAARE
HFRSPLVFSV HEAKGLEYPH VILYTLVSGQ RAAYAEVCDG VAQADLQVEQ LAYSRARDKG
DKSLELYKFY VNALYVAMTR AVATLVLVES DTSHPLLALL GLQVAETSAA RSATPVQTST
RDEWAQEARK LELQGKEEQA RAIRETFLQT KPVPWTPWSE VAMREYLPRA LDRTQPSNKP
RQALLDYALW HGQQVWIGQL AKQAQFAPAL RLAPGGDLDR AVAWRETALL RQRHLQPYAA
RNFKDLLRQC DQYGVDHRGP TGATPLMMAA RAGHLALVEA LLERAANPLL TDEFGHTPWL
AALNRAMEDA PFAQQSIGML FDRIAPPVLD VQTDARLVRL ERHQAEYWIL SLMLAGLKTQ
CTMCVKRPYS PYRCADGFFA EELGTTLVCL PEYLWKAQRH KRSYLNQVLA RAEINSTYLP
ARRLWARTTN GHYLPNPQLQ LRTHADGDAP TWRPVYEVLN LAWVNDGTSH SAPDFAGAGW
SLRPPVAAAA SPT