Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2540 |
Symbol | |
ID | 4692738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2870939 |
End bp | 2871664 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639850306 |
Product | ABC transporter related |
Protein accession | YP_997303 |
Protein GI | 121609496 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.656818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.632823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGCAG AAAATGAACG GCATGGTCTG GCACAGGCCA GGCCAATTCC TGTCGTGAGG CTGGCGGGAA TCGAGAAGTC CTACCGGGCC GGACGGATCA ATTTCATCGC CCTCGAGGAC ATCGACCTGG AGATCACGCG CGGCGAGTTC GTGGCGCTCT GCGGGCAGTC GGGCAGCGGA AAGAGCACCT TGCTCAACCT CGTTGGAGGG ATCGACCACC CCACTTCGGG CAGTGTCCAC TTTCTGGGCC AAGAATTGGC ATCCATGGGG GACACGGACT TGTCCAGGCT GAGAGCGCGC GAGATCGGCT TCATCTTCCA GTTCTTCAAC CTGCTTCCGG TGATGAGCGT GTTCGACAAC GTCGCCTACC CGCTGATGCT GCTGGGCAAG GCCAAGTCAC AGGCCAGGCA CGATGTCTTC GCGATGCTGG AGCGCGTCGG CCTCAGGGAC CATTGGCAGA AACGGCCGGC GGAGCTGTCG GGGGGCCAGC AGCAGCGCGT GGCCATCGCC CGGGCGTTGG TGAAGAAGCC CACCCTCATT GTGGCCGACG AGCCAACAGG CAACCTCGAT TCGGAGACCG GGCTGTCCAT CCTCGACCTC ATGAAGGAGA TCAACGCCGA GAGCAGCACC ACCTTGCTGG TGTCCACCCA TTCGGAATTC GTGAAAGACC GTGCATCGCG TGTCGTCGAG CTCAAGGACG GGAGAGTGAT TCATGATAGC AAGTAG
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Protein sequence | MAAENERHGL AQARPIPVVR LAGIEKSYRA GRINFIALED IDLEITRGEF VALCGQSGSG KSTLLNLVGG IDHPTSGSVH FLGQELASMG DTDLSRLRAR EIGFIFQFFN LLPVMSVFDN VAYPLMLLGK AKSQARHDVF AMLERVGLRD HWQKRPAELS GGQQQRVAIA RALVKKPTLI VADEPTGNLD SETGLSILDL MKEINAESST TLLVSTHSEF VKDRASRVVE LKDGRVIHDS K
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