Gene Veis_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2540 
Symbol 
ID4692738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2870939 
End bp2871664 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content61% 
IMG OID639850306 
ProductABC transporter related 
Protein accessionYP_997303 
Protein GI121609496 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.656818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.632823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGCAG AAAATGAACG GCATGGTCTG GCACAGGCCA GGCCAATTCC TGTCGTGAGG 
CTGGCGGGAA TCGAGAAGTC CTACCGGGCC GGACGGATCA ATTTCATCGC CCTCGAGGAC
ATCGACCTGG AGATCACGCG CGGCGAGTTC GTGGCGCTCT GCGGGCAGTC GGGCAGCGGA
AAGAGCACCT TGCTCAACCT CGTTGGAGGG ATCGACCACC CCACTTCGGG CAGTGTCCAC
TTTCTGGGCC AAGAATTGGC ATCCATGGGG GACACGGACT TGTCCAGGCT GAGAGCGCGC
GAGATCGGCT TCATCTTCCA GTTCTTCAAC CTGCTTCCGG TGATGAGCGT GTTCGACAAC
GTCGCCTACC CGCTGATGCT GCTGGGCAAG GCCAAGTCAC AGGCCAGGCA CGATGTCTTC
GCGATGCTGG AGCGCGTCGG CCTCAGGGAC CATTGGCAGA AACGGCCGGC GGAGCTGTCG
GGGGGCCAGC AGCAGCGCGT GGCCATCGCC CGGGCGTTGG TGAAGAAGCC CACCCTCATT
GTGGCCGACG AGCCAACAGG CAACCTCGAT TCGGAGACCG GGCTGTCCAT CCTCGACCTC
ATGAAGGAGA TCAACGCCGA GAGCAGCACC ACCTTGCTGG TGTCCACCCA TTCGGAATTC
GTGAAAGACC GTGCATCGCG TGTCGTCGAG CTCAAGGACG GGAGAGTGAT TCATGATAGC
AAGTAG
 
Protein sequence
MAAENERHGL AQARPIPVVR LAGIEKSYRA GRINFIALED IDLEITRGEF VALCGQSGSG 
KSTLLNLVGG IDHPTSGSVH FLGQELASMG DTDLSRLRAR EIGFIFQFFN LLPVMSVFDN
VAYPLMLLGK AKSQARHDVF AMLERVGLRD HWQKRPAELS GGQQQRVAIA RALVKKPTLI
VADEPTGNLD SETGLSILDL MKEINAESST TLLVSTHSEF VKDRASRVVE LKDGRVIHDS
K