| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2521 |
|---|
| Symbol | |
|---|
| ID | 4692021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2850736 |
|---|
| End bp | 2851707 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639850287 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_997284 |
|---|
| Protein GI | 121609477 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCT TGTCCACGCC CTTGCCGCTG CGGGCGCTCA CACTGCGCCA GTTGCAGTTC
TTCTCGGTGC TGGTGGAAGA AGGGCAGTTC GGCCGCGCAG CGAAGCGGCT GGCCATCACC
CAGCCCGCGC TCAGCAACGC GATCAAGCAA ATGGAAAAAC TGCTCGGTGC CGAACTGCTC
ACGCGCACCA CCCACCGCCT CGAACTCACG CCCGTGGGCG CCGAGGTGCT GGTGCGCACG
GATTTCCTGG TCCACTCTTT CGCGGTGGCG CTGCGCGACA TCGAGGGCAC GGTGCAGCGC
GGCCGGGCCT TCGTGCGCAT CGGCGTGATT CCCTCGGCCA GCGCGCGCGT CGCGGCGGCG
GCGAGCGAGT TCCTGAAAAC CGGCGAGCGG GAAGTGGAAC TGGCTTGGCG CGACGCCCCC
TCGACCGCGC TACTGGCCGA ACTGCGCAGC GGCCAGCTCG ACATGGCGGT GGCCGCCATC
ACCGAGCCGC CGGGCGGGCT GACCTGCATC GACCTGTTGC GCGATCCGCT GGTGCTGGTG
GTGCGCCGCG ACCATGCGCT GGCGGCGGCG GGCGGAGCCA CATGGGAGGC CATCGGCCGC
GAGCGCCTCG TGCTGTTCGA AAGCGGCAGC ATGCCGGCGC TGGGCAACCC GGCGCGCGCG
CAATTCGCGC AGGGTACCGA GCCCTGGCGC GTGAGCTATT CTGAAACGCT TTATGCGCTG
GTGCGAAGCG GGCAGGCGCT GGGGCTGATG CCGCGCCTGT ACACCGCGCC GCTGCGCGAT
CCCGAGTTGG CGGTGGTGCC CCTGCTCGAG CCGCGCATCG AACGCCGCGT GGTGCTGGCC
TATCTGCCGG GGCCGATGCG CAACATGGTG GCGCAGGAAC TGATCGCGTT CCTGCGCGAG
CGGCTGCCGC AGGCGGGCCA AGCCACGGCG CGCCGCATGG CCAACGGCAC GCGGACCAAG
CGCCAGGGCT AG
|
|---|
| Protein sequence | MATLSTPLPL RALTLRQLQF FSVLVEEGQF GRAAKRLAIT QPALSNAIKQ MEKLLGAELL
TRTTHRLELT PVGAEVLVRT DFLVHSFAVA LRDIEGTVQR GRAFVRIGVI PSASARVAAA
ASEFLKTGER EVELAWRDAP STALLAELRS GQLDMAVAAI TEPPGGLTCI DLLRDPLVLV
VRRDHALAAA GGATWEAIGR ERLVLFESGS MPALGNPARA QFAQGTEPWR VSYSETLYAL
VRSGQALGLM PRLYTAPLRD PELAVVPLLE PRIERRVVLA YLPGPMRNMV AQELIAFLRE
RLPQAGQATA RRMANGTRTK RQG
|
|---|
| |