Gene Veis_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2471 
Symbol 
ID4693546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2804550 
End bp2805461 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content62% 
IMG OID639850237 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_997234 
Protein GI121609427 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC CCCACGCACC GCCCTTGCCC CCCGGCGCAG CCCCCGGGCG GCGCATCGCC 
CCCTGGTGGC AGGCGGCGCC GTTCGCGCTG GTGTTCCTGC TGTTCTTTCT GCTTCCGCTG
GCGCTGATCG TGATGGTCAG TTTCTGGGAC TTCAATGAAT ATGAACTACT GCCGGGCTTC
ACCGGCAAGA ACTACCGGTC GATCTTCGCC GGCTGCGCGG ATGCGTCCGA CCTGTGCGTG
ACGCTCAAGA CCTACGGCTC GACGCTCAAA TTCTGCGCCC TGGTGTGGCT GATCACGCTG
GTGACCGGTT TTGCCGTGGC CTATTTCCTG GCTTTTCATG TGCGCTCCCC GGGCCTGCAA
ACGCTGCTGT TCGTGCTGTG CACGATCCCG TTTTGGACCT CCAACGTGAT CCGCATGATC
TCGTGGGTGC CGCTGCTCGG GCGCAACGGT CTGGTGAACC AGGCGCTGGT CGGTCTGGGG
CTGGTCGATG CGCCCGTCGA ATGGCTGCTG TTTTCCGACT TTTCCGTGGT GCTGGCCTTC
GTCCACCTGT ACACCATGTT CATGATCGTG CCGATCTTCA ACAGCATGAT GCGCATAGAC
CGCAGCCTGA TCGAGGCCGC CAGCGACAGC GGCGCCAGCG GCTGGCAAAC CTTGTGGAAC
GTGATCATTC CGCTCTCGCG CACCGGCGTC ATCATCGGCT CGATCTTCGT CATCACCATC
GTCATGGGCG ACTTCGTCAC CATCGGCGTG ATGGGCGGCC AGCAGATCGC GTCGGTCGGC
AAGATCATCC AGGTGCAGGC CTCCTACCTG CAGTTCCCGC TGGCAGCGGC GAATGCGGTG
ATCCTGCTGG CCGTGGTGCT GATGATCATT TACGGCCTGA CCCGCTGGGT CGATATCCGC
AAGGAGTTAT GA
 
Protein sequence
MSTPHAPPLP PGAAPGRRIA PWWQAAPFAL VFLLFFLLPL ALIVMVSFWD FNEYELLPGF 
TGKNYRSIFA GCADASDLCV TLKTYGSTLK FCALVWLITL VTGFAVAYFL AFHVRSPGLQ
TLLFVLCTIP FWTSNVIRMI SWVPLLGRNG LVNQALVGLG LVDAPVEWLL FSDFSVVLAF
VHLYTMFMIV PIFNSMMRID RSLIEAASDS GASGWQTLWN VIIPLSRTGV IIGSIFVITI
VMGDFVTIGV MGGQQIASVG KIIQVQASYL QFPLAAANAV ILLAVVLMII YGLTRWVDIR
KEL