Gene Veis_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2417 
Symbol 
ID4691374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2733801 
End bp2734916 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content68% 
IMG OID639850184 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_997181 
Protein GI121609374 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.146205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACG GCTTGGAAGA TATCGATGCG GAAGTCAGAC CGAAGTTGGA GTACCCATTC 
GACGCGCCGC CGGAACGCGG GCGCGTGCTG GAGGTGGCGC CCGGCATCCA CTGGCTGCGC
CTGCCGCTGC CCTTTGCGCT GAACCACATC AACCTGTGGG CCATCGCCGA CGACGATGGC
TGGGCCCTGG TCGACACGGG ACTGCGCTCC GACGACACCA TGCGGGTCTG GCGCGAGTTG
TTCGCCAACG CATCGGACCC GCGCCCGCTG ACCCGCGTGT TCGTCACGCA CATGCACCCC
GACCACATCG GCATGGCCGG CTGGCTCACC CGCAAGTTCG GCGCGCGCCT GTGGATGACG
CGGCTGGAGT ACCTCACCTG CCGGACGATG GTCGCCGATA CCGGCCGCGA GGCGCCCGCT
GACGGCATCG GGTTCTACCG GCGCGCCGGC TGGGGCCCCG AGTCGATCGA GAGTTACCGC
GTTCGCTTCG GCAACTTCGG CAAATACATC CATACCCTGC CCGACAGCTA CCGCCGCCTG
CGCGACGGCG AGGAACTGCG CATCGGCGCC CACACCTGGC GCGTCGTCGT GGGCAACGGC
CACTCGCCCG AGCACGCCTG CTTCCACTGC CCCGCGCTCA AGGTCTTGAT TTCGGGCGAC
CAAGTGCTGC CCCGGATCTC CTCGAATGTG TCGGTCTACC CCACCGAGCC GGACGCCGAC
CCGATGGCCG ACTGGTATGC GTCGCTGGCG AAAGTCAAGC AGGAAGTGCC CGACGACGTG
CTGGTGCTGC CGTCCCACAA CGAATGCTTC CGCGGTCTGC ACGCCAGGAT CGATGCGCTC
AAGCAAGGCC AGGACCGCGC CTTCGAGCGC CTGCGGCGGA CGCTGGCCGA GCCCAAGCGG
GCCATCGACG TTTTTGGCGC ATTGTTCGGG CGCTCCATCA GCGAGGCAGA CGTGCACCTG
CTCGGCATGG CCACCGGCGA AAGCATCGCT TGCCTGAACC ACCTGGTGCT CCGGGGCGAA
GTCCGCCGCG AGACCGATGC CAATGGCGTG GACTGGTACC GTTGCCCCGA GCCTGCGCGA
AGCGCGCCCG CGCAACGAAT TGCGCCAGCG TCTTGA
 
Protein sequence
MSDGLEDIDA EVRPKLEYPF DAPPERGRVL EVAPGIHWLR LPLPFALNHI NLWAIADDDG 
WALVDTGLRS DDTMRVWREL FANASDPRPL TRVFVTHMHP DHIGMAGWLT RKFGARLWMT
RLEYLTCRTM VADTGREAPA DGIGFYRRAG WGPESIESYR VRFGNFGKYI HTLPDSYRRL
RDGEELRIGA HTWRVVVGNG HSPEHACFHC PALKVLISGD QVLPRISSNV SVYPTEPDAD
PMADWYASLA KVKQEVPDDV LVLPSHNECF RGLHARIDAL KQGQDRAFER LRRTLAEPKR
AIDVFGALFG RSISEADVHL LGMATGESIA CLNHLVLRGE VRRETDANGV DWYRCPEPAR
SAPAQRIAPA S