| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2395 |
|---|
| Symbol | |
|---|
| ID | 4694574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2709129 |
|---|
| End bp | 2713889 |
|---|
| Gene Length | 4761 bp |
|---|
| Protein Length | 1586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639850162 |
|---|
| Product | glutamate synthase (ferredoxin) |
|---|
| Protein accession | YP_997159 |
|---|
| Protein GI | 121609352 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0069] Glutamate synthase domain 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAG TGCCCACGGT AAGCACGGCG ACCACGGACG CCGAGATCGA GCATTTGCAG
CAATCGGGCC TGTATGCCCC GGCGCACGAG CACGATGCCT GCGGCCTGGG CTTCGTGGCC
CATATCAAGG GCGTCAAGCG CCACGACATC GTGACCCAGG CGCTGAAGAT TCTGGAAAAC
ATGGACCACC GTGGCGCCGT CGGTGCCGAC CCGCTGATGG GCGACGGCAC CGGCATCCTG
CTGCAGATCC CCGATGCGCT GTACCGTGAG GAGATGGCCC GCCAGGGCGT GGCCTTGCCG
GCGGCCGGGG AATATGGCGT GGGCATGATT TTTCTGCCCA AGGAGCATGC CTCGCGGTTG
GCCTGCGAGC AGGCGATGGA GCGCGCGATC AAGGCCGAGG GCCAGGTGCT GCTGGGCTGG
CGCGATGTGC CGGTCGACCG CGAGATGACG ATGTCGCCCG CCGTGCGCAA GAAGGAGCCG
ATACTGCGCC AGGTGTTCAT TGGCCGTGGC AATGACGTGA TCGTGCAGGA CGCGCTCGAG
CGCAAGCTGT ATGTGATCCG CAAGACCGCC AGCGCCGCGA TACAGGCGCT GCGCCTCAAG
CATGGCAAGG AATACTATGT TCCCAGCATG AGCAGCCGCA CCGTGGTCTA CAAGGGCCTG
CTGCTGGCCC GGCAGATCGG CAACTACTAC CTGGACTTGC AAGATGTCCG TTGCGTCTCG
GCCATTGGCT TGGTGCACCA GCGCTTTTCC ACCAACACCT TTCCGGAATG GCCGCTGGCG
CACCCGTACC GCTATGTGGC GCACAACGGT GAAATCAACA CCGTCAAGGG CAATTACAAC
TGGATGAAGG CGCGCGAAGG CGTGATGGCC TCGCCGGTGC TGGCGGCCGA TCTGAAAAAG
CTCTACCCAA TCAGTTTCGC CCACCAGTCG GACACGGCCA CCTTCGACAA CTGCCTGGAA
CTGCTGACGA TGGCCGGCTA CCCGATCAGC CAGGCGGTGA TGATGATGAT CCCCGAGCCT
TGGGAACAGC ACACCACGAT GGACGAGCGC CGCCGCGCCT TCTATGAATA CCACGCGGCC
ATGCTGGAGC CCTGGGACGG CCCGGCCTCG ATCGTGTTCA CCGACGGTCG CCAGATCGGC
GCCACGCTCG ACCGCAACGG CCTGCGCCCA TCGCGCTACT GCATCACCGA CGATGATCTG
GTCATCATGG GTTCCGAATC GGGCGTGCTG CCGGTGCCCG AGAACAAGAT CGTGCGCAAG
TGGCGCTTGC AGCCGGGCAA GATGTTCCTG ATCGATCTGG AGCAGGGGCG CATGATCGAT
GACGACGAGC TCAAGGCCAA TATCGTCAAC ACCAAGCCGT ACAAGCAGTG GATCGACAAC
CTGCGCATCA AGCTCGACAG CATCGACGCC GGCGCGCAGG CGGCTGCGCC GCCGGCAAGC
GCGCTGGCGC TGCTGGAGCG CCAGCAAGCC TTTGGCTACA CCCAGGAAGA CCTCAAGTTC
CTGCTCGCGC CAATGGCCAG GAACGGCGAA GAGGGCATTG GCTCGATGGG CAACGACAGC
CCGCTGGCCG TGCTCTCGGG CAAGAACAAG CCGCTGTACA GCTACTTCAA GCAGTTGTTC
GCCCAGGTGA CGAATCCGCC GATCGACCCG ATCCGCGAGG CCATCGTGAT GTCGCTCAAC
AGCTTCATCG GCCCCAAGCC CAACCTGCTG GACATCAACC AGGTCAATCC GCCGATGCGC
CTGGAAGTGA GCCAGCCGGT GCTGGACTTT GCCGACATGG CCAAACTGCG CGACATCGAG
CGCTACACCC ACGGCAAGTT CAGGAGCGCC ACCATCGACA TCACCTACCC GCTGGCCTGG
GGCCACGAAG GCGTGGAGGC CAAACTGGCC TCGCTGTGCG CCCAGGCGGT GGATGCGATC
CAGGGCGGCG CCAATATCCT GATCATCAGC GACCGCGCGG TCAGCGCCAC GCAGTTGGCC
ATCCCGGCGC TGCTGGCGCT GTCGGCCATC CACCAGCATC TGGTGGGGGA GGGCTTGCGC
ACCACGGCCG GCCTGGTGGT CGAGACCGGC ACGGCGCGCG AAGTGCACCA CTTTGCCGTG
CTCGGCGGTT ACGGCGCCGA GGCCGTGCAC CCCTACCTGG CGCTGGAAAC CCTGGCCGAC
ATGCACCAGG ACCTGGGCGG CGAGCTGTCG GCCGACAAGG CCATGGCCAA CTACATCAAG
GCGATCGGCA AGGGCCTGTC CAAGATCATG TCCAAGATGG GCGTGAGCAC CTACATGAGC
TACTGCGGCG CCCAACTGTT CGAGGCCATA GGCCTGAGCA CCGACACCGT GCGCAAGTAT
TTCACCGGCA CCGCCAGCCG GATCGAAGGC ATAGGCGTGT TCGAGATCGC CGAAGAAGCC
ATCCGCATGC ACAAGGCGGC CTTTGGCGAC GCCCCGGTGC TGGCCACGAT GCTCGATGCC
GGCGGTGAAT ACGCCTGGCG CATCCGTGGC GAAGAGCATA TGTGGACGCC CGACGCGATT
GCCAAACTGC AGCACAGCAC CCGCGCCAAC AACTGGAACA CCTACAAGGA GTACGCCCAG
ATCATCAACG ACCAGGGCCG GCGCCACATG ACGCTGCGCG GCCTGTTCGA GTTCAGGATC
GATCCGGCCA AGGCGATTGC CATCGATGAG GTCGAGCCGG CCCGGGAAAT CGTCAAGCGC
TTTGCCACCG GCGCGATGTC GCTGGGTTCG ATCTCCACCG AGGCCCATGC CACGCTGGCC
GTGGCCATGA ACCGCATCGG CGGCAAGAGC AACACCGGCG AAGGGGGTGA AGACGCAGCG
CGCTACCGCA ACGAGCTCAA GGGCATACCG ATCAAAAAGG GCGATTCGCT CAAGAGCGTG
ATCGGCGCCG ACAACGTCGA AGTCGACCTG CCGCTGCAAG ACGGCGACTC GCTGCGCAGC
CGCATCAAGC AGGTGGCTTC GGGCCGCTTT GGCGTGACGG CCGAGTACCT CTCGTCGGCC
GACCAGATCC AGATCAAGAT GGCCCAGGGC GCCAAGCCCG GCGAAGGCGG CCAACTGCCC
GGCGGCAAGG TCTCCGACTA CATCGGCAAA CTGCGCCACA GCGTGCCCGG TGTGGGCCTG
ATCTCGCCCC CGCCGCACCA TGACATCTAC TCGATCGAAG ACCTGGCGCA GCTGATCCAC
GACCTGAAGA ACGTGGCCCC GCAGGCCAGC ATCAGCGTCA AGCTGGTGTC CGAAGTGGGC
GTGGGCACGA TTGCGGCCGG CGTGGCCAAG TGCAAGAGCG ACCATGTGGT GATTGCCGGG
CATGACGGCG GCACGGGCGC ATCGCCCTGG TCGTCGATCA AACATGCCGG CAGCCCCTGG
GAAATCGGCC TGGCCGAGAC CCAGCAGACC CTGGTGCTCA ACCGCCTGCG TGGCCGCATC
CGGGTGCAGG CCGATGGCCA GATGAAGACT GGCCGCGATG TCGTCATCGG CGCGCTGCTC
GGCGCCGACG AGTTCGGTTT CGCCACCGCG CCGCTGGTGG TGCAAGGCTG CATCATGATG
CGCAAATGCC ATCTGAACAC CTGCCCCGTG GGCGTGGCCA CGCAAGACCC GGCGCTGCGC
AAGAAATTCT CGGGCAAGCC CGAGCATGTG GTGAACTACT TCTTCTTCAT TGCCGAAGAA
GTGCGCCAGA TCATGGCCCA ACTGGGCCTG CGCAAATTCG ACGAGTTGAT CGGCCGCAGC
GACCTGCTCG ACATGCGCGC CGGCCTGGCG CACTGGAAGG CCCGGGGCCT GGACTTTGGC
CGCCTGTTTG CGCAGCCGAA CGCGCCGGCT GAAGTGGCGC GCCGGCATGT CGAGGAGCAG
GAGCACAACA TCGCCCACAC GCTCGACCGC AAACTGATCG AGCACAGCCG GCCCGCGCTC
GAAAAAGGCG AGCGGGTGCA GTTCATCGAA GTGGCGCACA ACGTCGACCG CTCCGTGGGC
GCGATGCTCT CGGGCGCGCT GACCCGCCTG CACCCGCAGG GCCTGCCCGA CGACACCATC
CGCATACAGC TCGAAGGCAC GGGCGGCCAA TCGTTCGGCG CCTTCCTCGC GCGCGGCATC
ACGCTGTACC TGATCGGCGA CGCCAATGAC TACACCGGCA AAGGGCTGTC GGGGGGGCGC
GTGATCGTGC GCCCGAGCAT CGACTTTCGC GGTGATGCAG TGCGCAACAC CATCGTCGGC
AACACCGTGA TGTACGGCGC CACCACCGGG GAAGCCTTCT TCAGCGGCGT GGCCGGCGAG
CGCTTTGCCG TGCGTTTGTC GGGCGCCACG GCGGTGGTCG AAGGCACGGG CGACCATGGC
TGCGAATACA TGACCGGCGG CACCGTGGTG GTGCTCGGCA AGACCGGCCG CAACTTCGCC
GCCGGCATGA GCGGCGGCGT GGCCTATGTG TACGACGAAG ACGGCCAGTT CGACAGCCGT
TGCAATCTGG CCATGGTCAC GCTCGAACGC ATCGTGCCGG CCACCGAACA AGAGGCCACG
GTGCCGCGCG CGGCATGGCA CCAGGGCCAG ACCGACGAAG CCCTGCTGAA AAAGCTGCTG
CAAGAGCACA ACCGCTGGAC CGGCAGCAAG CGCGCGCGCG AACTGCTGGA CCATTGGAGC
GCAGCGCGCA GCCAATTCGT CAAGGTCTTG CCGACCGAGT ACCGGCGGGC GCTGGCCCAA
ATGCATGAAC GCCAACTGCG GCAAGAGCGT GCCGCGTCGG CGCCGGATGC GCAGCAGCGG
CAAGCAGTCC TGGCGCAATG A
|
|---|
| Protein sequence | MTTVPTVSTA TTDAEIEHLQ QSGLYAPAHE HDACGLGFVA HIKGVKRHDI VTQALKILEN
MDHRGAVGAD PLMGDGTGIL LQIPDALYRE EMARQGVALP AAGEYGVGMI FLPKEHASRL
ACEQAMERAI KAEGQVLLGW RDVPVDREMT MSPAVRKKEP ILRQVFIGRG NDVIVQDALE
RKLYVIRKTA SAAIQALRLK HGKEYYVPSM SSRTVVYKGL LLARQIGNYY LDLQDVRCVS
AIGLVHQRFS TNTFPEWPLA HPYRYVAHNG EINTVKGNYN WMKAREGVMA SPVLAADLKK
LYPISFAHQS DTATFDNCLE LLTMAGYPIS QAVMMMIPEP WEQHTTMDER RRAFYEYHAA
MLEPWDGPAS IVFTDGRQIG ATLDRNGLRP SRYCITDDDL VIMGSESGVL PVPENKIVRK
WRLQPGKMFL IDLEQGRMID DDELKANIVN TKPYKQWIDN LRIKLDSIDA GAQAAAPPAS
ALALLERQQA FGYTQEDLKF LLAPMARNGE EGIGSMGNDS PLAVLSGKNK PLYSYFKQLF
AQVTNPPIDP IREAIVMSLN SFIGPKPNLL DINQVNPPMR LEVSQPVLDF ADMAKLRDIE
RYTHGKFRSA TIDITYPLAW GHEGVEAKLA SLCAQAVDAI QGGANILIIS DRAVSATQLA
IPALLALSAI HQHLVGEGLR TTAGLVVETG TAREVHHFAV LGGYGAEAVH PYLALETLAD
MHQDLGGELS ADKAMANYIK AIGKGLSKIM SKMGVSTYMS YCGAQLFEAI GLSTDTVRKY
FTGTASRIEG IGVFEIAEEA IRMHKAAFGD APVLATMLDA GGEYAWRIRG EEHMWTPDAI
AKLQHSTRAN NWNTYKEYAQ IINDQGRRHM TLRGLFEFRI DPAKAIAIDE VEPAREIVKR
FATGAMSLGS ISTEAHATLA VAMNRIGGKS NTGEGGEDAA RYRNELKGIP IKKGDSLKSV
IGADNVEVDL PLQDGDSLRS RIKQVASGRF GVTAEYLSSA DQIQIKMAQG AKPGEGGQLP
GGKVSDYIGK LRHSVPGVGL ISPPPHHDIY SIEDLAQLIH DLKNVAPQAS ISVKLVSEVG
VGTIAAGVAK CKSDHVVIAG HDGGTGASPW SSIKHAGSPW EIGLAETQQT LVLNRLRGRI
RVQADGQMKT GRDVVIGALL GADEFGFATA PLVVQGCIMM RKCHLNTCPV GVATQDPALR
KKFSGKPEHV VNYFFFIAEE VRQIMAQLGL RKFDELIGRS DLLDMRAGLA HWKARGLDFG
RLFAQPNAPA EVARRHVEEQ EHNIAHTLDR KLIEHSRPAL EKGERVQFIE VAHNVDRSVG
AMLSGALTRL HPQGLPDDTI RIQLEGTGGQ SFGAFLARGI TLYLIGDAND YTGKGLSGGR
VIVRPSIDFR GDAVRNTIVG NTVMYGATTG EAFFSGVAGE RFAVRLSGAT AVVEGTGDHG
CEYMTGGTVV VLGKTGRNFA AGMSGGVAYV YDEDGQFDSR CNLAMVTLER IVPATEQEAT
VPRAAWHQGQ TDEALLKKLL QEHNRWTGSK RARELLDHWS AARSQFVKVL PTEYRRALAQ
MHERQLRQER AASAPDAQQR QAVLAQ
|
|---|
| |