| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2379 |
|---|
| Symbol | |
|---|
| ID | 4695102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2691000 |
|---|
| End bp | 2691713 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639850145 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_997143 |
|---|
| Protein GI | 121609336 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGTC AAATCGTTCT GGACACCGAA ACCACGGGCC TGTCGGCCGA CAGTGGCGAC
CGCATCATCG AACTCGGCTG CGTCGAATTG CTCAACCGCA AGCTCACCGG CAACAACCTG
CACCTGTACT TCAACCCGGG CCGGGACAGC CACGAAGATG CGCTGAAGGT CCATGGCATC
AGCAATGAGT TCCTGAAAGA CAAACCCCGG TTTGCCGAAC TGGTCGACGA CATCCTGCAA
TACCTGCAAG GGGCCGAACT GATCATCCAC AACGCCGCCT TCGATGTCGG CTTTTTGAAC
AAGGAACTGG AACTGGCGGG GCACCCGGCG CTTGCCCACT GCGTCGAGCG CGTCACCGAC
ACGCTGGCCA TGGCCAAAGA ACTGTACCCG GGCAAGCGCA ACTCGCTCGA CGCGCTGTGC
GACCGCCTGG GCGTGGACAA CTCCGGCCGC ACGCTGCACG GCGCCTTGCT CGATGCCGAA
CTGCTGGCCG ATGTGTACAT CCACCTCACG CGCGGGCAAA AGGCCTTGCT GATCGCCGAC
GAGGCGCAGC CAAGCGCCAC TGACCTGCCG CTGCTACCCA TCGACTTGCA TGCCTTGGTG
CTGCCGGTGC TGCACGCCAA TGCGCAGGAG CAGCAAGCGC ATGCCGAGGT GCTGGCGCAG
ATCGACAAGG CCAGCGGGGG CAAAACCATT TGGCGCACGC TGCCATCGAT CTGA
|
|---|
| Protein sequence | MPRQIVLDTE TTGLSADSGD RIIELGCVEL LNRKLTGNNL HLYFNPGRDS HEDALKVHGI
SNEFLKDKPR FAELVDDILQ YLQGAELIIH NAAFDVGFLN KELELAGHPA LAHCVERVTD
TLAMAKELYP GKRNSLDALC DRLGVDNSGR TLHGALLDAE LLADVYIHLT RGQKALLIAD
EAQPSATDLP LLPIDLHALV LPVLHANAQE QQAHAEVLAQ IDKASGGKTI WRTLPSI
|
|---|
| |