Gene Veis_2366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2366 
Symbol 
ID4691057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2676674 
End bp2677777 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content65% 
IMG OID639850132 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_997130 
Protein GI121609323 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACA AGCTCGTGAT CACCGGCCTG ACCAAGCAGT ACGGCCAGTT CGTCGCGCTT 
GCGCCCACCG ACTTGCGCGT TGCGCAGGGC GAGTTCCTGA GCTTGCTCGG GCCCTCTGGC
TCGGGCAAGA CCACCTTGCT CAGCCTGATC GCCGGGCTGT CGGTGCCCGA TGGCGGGCAA
CTGCTGATCA ACGGGGTGGA TGTGACCCAT GGCGCGCCCT ATGAGCGTGA CATTGGCATG
GTGTTCCAGA ACTACGCGCT GTTTCCGCAT ATGACGGTCG AGGACAACAT CTGCTTTCCA
CTGAAGATGC GCAAGCTCGG CGAGTCCAGC GCGCGCCGGC AGGCGGCGCA GGCGCTGGAG
ATGGTGCGCC TGCCCCAACT GGCACGACGC TTTCCGAAGG AGCTGTCGGG GGGCCAGCAG
CAGCGCATCG CGCTGGCGCG TTGCCTGGTG TACCGCCCGT CGATCATCCT GATGGATGAG
CCGCTGGGCG CGCTCGACAA GAAACTGCGC GACCAGATGC AGTGGGAGAT CAAGCGCATC
CATCGCGAGC TTGGAACCAC CATCGTCTAT GTCACGCATG ACCAGGAAGA GGCGATGACG
ATGTCCGACA GAATCTGTCT GATGAACGGC GGCAAGATCG AGCAGTCGGG CAGTCCCCGC
GAACTGTATT TGCGCCCCCG CACGCTGTTC GTCGCCGACT TTCTGGGCGA GTCCAATCTG
TTTGCCGGCG TCGTCACCGA AGTGCAAGGC GACGAGGTGC GGGTGGAATT GGCGCATGCC
GGCTCCCGCG TCCGGGCCAG GTGCAGCGCC GCCCTGTGCG TTGGCCGCAA GGTGCGGGTG
ATGGTGCGGC CGCAGAACCT GTGCCTGCAA GCGGGCCCGA CGGATCCGAC GAACCCGGCA
GACATGCTGG CCGGCCAGGC CATGCGCGGC CAGGTGCTCG ACAGCATGAT CACCGGCAGC
CTCACCAAGG TCTATGTGCA GACAGCGGCC GACACGCCGG TGGTGGTGTC CTATCCGACG
GCCTGGCCAG CGCAGCGCCA TGCGCCCGGT CAGGAACTGA TCCTGCATTG GAACGCCGCC
GACGCCGTCG CGGTGCCCGA GTAA
 
Protein sequence
MADKLVITGL TKQYGQFVAL APTDLRVAQG EFLSLLGPSG SGKTTLLSLI AGLSVPDGGQ 
LLINGVDVTH GAPYERDIGM VFQNYALFPH MTVEDNICFP LKMRKLGESS ARRQAAQALE
MVRLPQLARR FPKELSGGQQ QRIALARCLV YRPSIILMDE PLGALDKKLR DQMQWEIKRI
HRELGTTIVY VTHDQEEAMT MSDRICLMNG GKIEQSGSPR ELYLRPRTLF VADFLGESNL
FAGVVTEVQG DEVRVELAHA GSRVRARCSA ALCVGRKVRV MVRPQNLCLQ AGPTDPTNPA
DMLAGQAMRG QVLDSMITGS LTKVYVQTAA DTPVVVSYPT AWPAQRHAPG QELILHWNAA
DAVAVPE